Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT35315
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Entry
AGABI1DRAFT35315 CDS
T03136
Symbol
AGABI1DRAFT_35315
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT35315 (AGABI1DRAFT_35315)
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT35315 (AGABI1DRAFT_35315)
03036 Chromosome and associated proteins [BR:
abp03036
]
AGABI1DRAFT35315 (AGABI1DRAFT_35315)
Enzymes [BR:
abp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGABI1DRAFT35315 (AGABI1DRAFT_35315)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AGABI1DRAFT35315 (AGABI1DRAFT_35315)
mRNA cycle factors
Common to processing body (P body) and stress granule
AGABI1DRAFT35315 (AGABI1DRAFT_35315)
Spliceosome [BR:
abp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
AGABI1DRAFT35315 (AGABI1DRAFT_35315)
Chromosome and associated proteins [BR:
abp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AGABI1DRAFT35315 (AGABI1DRAFT_35315)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
18829134
NCBI-ProteinID:
XP_007327112
JGI:
Agabi_varbur_1_35315
UniProt:
K5X2I3
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MTNGLVNGNQSLESKFGSLGLGKSAYVPPHLRAQRAASSPVVSNGCVTGWNDSRPTTPSN
APRGGSAFDSRTPAPRSGFASRDTNRGGGWSGPSVNSSSSPRDPSGPSFGYGVWKDGQHV
VGGRNTRLEKELFGDATDTSKQHTGINFEKYDDIPVEATGADVPEPVLSFTSPPLDAVLL
ENIKYAMYTTPTPVQKYSIPIVARGRDLMACAQTGSGKTGGFLFPILSASFQLGPSPPPP
DTGNHFSRNRKAYPTALILAPTRELVSQIHDEARKFAYRSWVRPAVVYGGADINQQLRLI
ERGCDLLSATPGRLVDLIERGRISLSNIKYLVLDEADRMLDMGFEPQIRRIVQGEDMPDV
HERQTLMFSATFPRDIQILAKDFLKDYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLD
ILASQPKADLGLSLIFVETKRMADMLSDFLMGNNLPATSIHGDRSQREREMALQTFRTGR
TPILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVSTAFFNRNNKN
IVRDLVELLREANQEIPGWLETVAHEATFGSGGSRGGRGRGGRGGRGSTGRDYRAGGGGG
YGGGGGGGFGGGFSSGGGYGGGPARYGPPSGGGGGGYGGYGGSHGGNSGGGGWW
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatggtcttgtaaacggaaaccagagcctcgagagcaaattcggttctcttggc
ctcggcaagtctgcctatgttccccctcatctccgggcgcagcgagctgcctcgtctcct
gtagtttctaatgggtgtgtaaccggctggaacgattctcgcccgactaccccctccaac
gcaccccgcggtggctccgcctttgactccagaactcctgcacctagaagcggtttcgcc
tctcgtgataccaatcgcggaggtggctggtccggtcctagtgtcaactccagctcctca
cctcgggatccctctggcccgtcctttggttatggtgtctggaaggatggccaacacgtc
gtgggtgggcgcaatacgcgcctggaaaaggagctttttggtgacgctaccgatacctcc
aaacaacacaccggcattaatttcgagaaatacgatgatatccctgtcgaggctactggc
gcggatgtaccagagcctgtcctctctttcacctctcccccccttgacgctgtcctgttg
gaaaacatcaagtatgccatgtacactactcctacccccgttcaaaagtactccattcct
attgtggcgagaggaagagatttgatggcttgtgcccagactggttctggcaaaaccgga
gggttcttgtttccaattctttctgcctctttccagctgggtccttccccacccccacca
gacactggtaaccacttcagccgcaaccgaaaggcttatccgacggctcttattttggct
cctacacgtgaactcgtttcgcaaattcatgacgaagcccgaaagttcgcttatcgctcc
tgggttcgacctgccgtcgtctacgggggtgctgacataaatcaacaactgcgtctaatt
gagcgcgggtgtgacctcctgagtgccactcccggtcgtctcgttgatctcatcgagcgc
gggcgcatcagcttgtcaaacatcaaatacttggtgttggatgaggctgatcgcatgttg
gacatgggtttcgaaccccagattcgacgcatcgttcaaggcgaagacatgcctgacgtt
cacgaacgtcagactctcatgttcagtgctaccttccctcgtgacattcaaattctagcc
aaagacttcttgaaggactatatcttcctgtctgtcggccgagtcggtagcacgtccgag
aacatcacgcaaaaaatcgagtacgttgaagatgccgataagcgcagcgtcctactcgat
atactcgcttcccaacccaaggcggatctcggtctctccctcatctttgtggagaccaag
cgcatggctgatatgctaagtgacttcctgatgggtaacaaccttcccgctacgtctatc
cacggtgatcgtagccagcgcgagcgtgagatggcactccagaccttccgcactgggagg
acgcccatcctagttgcaactgctgtcgccgcgcgtggtttggatattcccaacgttacc
cacgtcatcaactatgatcttccctctgatatcgacgactacgttcatcgtatcggtcgt
accggccgtgctggaaacactggtgtcagtaccgccttcttcaataggaacaacaaaaac
atcgttcgtgatcttgttgagcttcttcgtgaggccaaccaggagattccgggctggcta
gaaactgttgctcatgaagcaacctttggcagtggcggatcccgcggcggacgcgggcgc
ggaggcaggggcggcaggggcagcacaggtagggactaccgtgccggtggtggtggcggc
tatggtggaggtggtggtggcggattcggtggaggcttcagcagtggtggaggctatggt
ggtggtcccgcacgatacggtcctcctagtggtggtggtggtggtggttacggcggatac
ggtggaagtcatggcggcaactcgggcggtgggggatggtggtaa
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