Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT35783
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Entry
AGABI1DRAFT35783 CDS
T03136
Symbol
AGABI1DRAFT_35783
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03030
DNA replication
abp03410
Base excision repair
abp03420
Nucleotide excision repair
abp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
03410 Base excision repair
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
03420 Nucleotide excision repair
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
03430 Mismatch repair
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abp03032
]
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
03036 Chromosome and associated proteins [BR:
abp03036
]
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
DNA replication proteins [BR:
abp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
DNA Replication Termination Factors
ELG1-RFC complex
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
Chromosome and associated proteins [BR:
abp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
Check point factors
HRAD17(Rad24)-RFC complex
AGABI1DRAFT35783 (AGABI1DRAFT_35783)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
AAA_11
AAA_30
DUF815
ResIII
AAA_24
AAA_22
DEAD
RuvB_N
AAA_16
AAA_assoc_2
RCF1-5-like_lid
AAA_19
AAA_5
AAA_3
AAA_7
ATPase_2
Viral_helicase1
AAA_28
Fe-S_biosyn
Mg_chelatase
PIF1
DNA_pol3_delta
bpMoxR
nSTAND3
MCM
IstB_IS21
Methyltransf_31
RNA_helicase
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
18829159
NCBI-ProteinID:
XP_007327137
JGI:
Agabi_varbur_1_35783
UniProt:
K5X1P9
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MSDTLPTPSNGKGKEVDTGTADAESLPWVEKYRPVTLDDVVSHKDITSTIERFIERNRLP
HLLFYGPPGTGKTSTILAVARRIYGTSYKKQILELNASDDRGIDVVREQIKQFAETRTLF
SKGFKLIILDEADMMTQAAQAALRRVIEQFTKNVRFCIICNYVNKITPAIQSRCTRFRFS
PLPMTEVEKRVDMVVEAENVPLTTEGKNALLKLSKGDMRRALNVLQACHAAYDIIGESEI
YTCTGNPHPSDIEIIVNSMLSDEFTASYQMISKMKTERGLALQDLLTGAFDYIDTIELKP
HARIYLLDHLASTEHRLSTGGSEKIQLTALLGAFKTAVELSTKG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaccttgcctacaccatcgaacggcaagggtaaggaagtcgacacagggact
gctgacgctgaatctttgccatgggtggagaaatacagaccagtgacactggacgacgtc
gtttcgcacaaggatattacgagcacgattgaaagattcattgagaggaaccggctacct
catcttctattctacggtcccccaggaactggaaaaacgtctactatactcgcagtagca
aggcgaatatatggcaccagttataaaaagcagatactcgaactcaatgcttctgacgat
cgtggaatagatgttgttcgtgaacagatcaaacagttcgctgaaaccaggaccctcttc
tccaagggtttcaagctcattattctggatgaagcagatatgatgacacaagcagcccag
gcagctcttcggcgagtaatcgaacaattcacgaaaaatgtccgcttttgcatcatctgc
aattatgtcaataagattacaccagctatccaaagtcgttgtacgaggtttagattttca
cctctgccgatgacagaagtcgagaaacgagtggatatggtcgttgaagccgaaaatgtc
cctctgactactgaagggaagaatgccttgttgaaactttccaagggagacatgcgaagg
gctctcaacgtcctccaagcttgccatgctgcatatgacatcataggggaaagcgaaatt
tacacttgcactggcaatcctcacccgtccgacatagagatcatcgtcaattcaatgtta
tcggatgagtttacagcttcttaccagatgatttcgaagatgaagacggaacgtggatta
gcgctccaggatttattgactggtgcttttgactatattgatactatcgagctcaaacca
catgcaagaatatatctacttgatcatctcgcttcgacagagcaccgtttatcgaccggt
ggaagtgaaaaaatacaactcactgcccttctgggcgctttcaagactgcggtggagtta
tccacgaaaggatga
DBGET
integrated database retrieval system
