Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT40343
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Entry
AGABI1DRAFT40343 CDS
T03136
Symbol
AGABI1DRAFT_40343
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AGABI1DRAFT40343 (AGABI1DRAFT_40343)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT40343 (AGABI1DRAFT_40343)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
AGABI1DRAFT40343 (AGABI1DRAFT_40343)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_2
BHD_1
Transglut_core
DUF3246
Motif
Other DBs
NCBI-GeneID:
18829353
NCBI-ProteinID:
XP_007329684
JGI:
Agabi_varbur_1_40343
UniProt:
K5WVP3
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MDDHLLSLGADSDDENDWEEVEFPELQDRAIEITLNAQPKAGEDKQKRGLSHAERILRID
CHKIHTICLLTNAWVRNKYLNDELLHARLLSICPLKYQDSFATIHKSRIPDPNQRGRMFE
NAVRDLASWWSSAFEVVPEGHLRNRTFLDVEKVLERYHLLSNDDDSVNGEMDVEALQDVL
DEDGEFIRTPKSLMKHALMARGSRDTSAQLFTALCRALGIPARLVASLQSVPWQASVGKS
KQKYEKKTKGKKKGKAPASESTSVASEGGESENENDIKEVGASTPTRESKGKGKAADFPG
SGQRLDGGSMSAKAKGKQKARPPIKLRKARPKGRTLGSLSPTSDASPYPTITPPVFWTEV
FSKPDGRWLPVDPIRNIVNKRKVFDPTPSSINTPPNAAKPSRTQQNAENRLLYVLAFEED
GFARDVTRRYARDYNTKVVKAQGGSGAANMGGRRAWWGHVLSIVHRPYRLHRDDIEDEEL
ETAQMLEGMPTTMTGFKDHPVYVLIRHLKQNETLYPPPPSTPELGKFRGEPVYPRSAVVS
LKTAENWMRNEGRTIKTGEQPLKMVKVRAGTVNKLRELEVLKEAGGSGEGNLGDAMQGLY
ARLQTELYIPDPVVDGIIPKNNFGNIDLYTPSMLPQGAAHIPYKGVAKVARKLGFDFAEA
VTGFEFKKRRAYPVLEGVVIAKENEDALLEAFWESERIAEARAQVKREERVLKQWKRLIQ
GLRIRQRLQEQYGTTPGVVGEGGGADKGQEGKVEISRRDDNHNAKEPSEHDHNDFIEADD
VVQAFHLPKFQHVPDAPVVSFHHQHSSKPLERGEENLMRAIPDFMTYDLDNEDEHRHIIP
LNLRDASNNNNNKTTENPALMMIPKTMAQFAEDAAAQQEVDLQVHIEDITTSGGVNGNEV
ESLRRGKVRKLSSSAAPTMNVRIMGQRHRNMRGRTTMGGRKRKQGDEDDFLSDDDDDEDE
SKRTTNPTSTSTTTTTRKRRKKDVPVSTRTLRPRRSKSVVVYAENPDDDDDDEG
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccacctcctttcgctgggcgctgacagtgacgacgaaaatgattgggaagaa
gtcgagttccctgaactacaggacagggccattgaaattactctaaatgcgcaacccaag
gccggcgaggacaagcagaagagaggtctatcccatgcagaacgcatacttcgaatcgat
tgccacaagatacatacaatctgcttgctaacaaatgcatgggtgcggaataagtatctc
aacgatgaattacttcacgctcgtttgctgtcaatatgcccactcaaatatcaagattct
tttgcgacgatacataaatcacgaatcccggatccgaatcagcgggggcggatgttcgaa
aacgcagtccgagacctcgccagttggtggtcgtcagctttcgaagtagttccagagggg
catctccgcaatcgtactttcctcgatgttgaaaaagtcttagaacgataccatcttctt
tccaacgacgatgattctgttaatggtgaaatggacgtggaagctcttcaagatgtcttg
gacgaggacggagagttcatacggacccctaaaagtctgatgaagcatgctcttatggca
agaggctcaagagacacaagtgcgcaactttttacggctttatgtcgggctcttgggata
cccgctcgcctcgtagcgagtcttcagagcgtgccttggcaagcaagtgtcggaaaatcg
aaacaaaaatatgagaaaaagaccaagggcaaaaagaaagggaaagctccagcttctgag
agtacttctgtggcctccgagggtggagaatctgaaaatgaaaatgacataaaagaagtg
ggcgcctcaactccgacgcgggagtcaaaaggaaagggcaaggccgcagactttccagga
agcggacaacgactcgatggtggatcaatgtcagccaaagcgaaggggaagcaaaaagca
agacctccaatcaagttaagaaaagctagaccaaaaggtcgtacactaggaagtctttcg
ccgacttcagatgccagtccttatccaacgatcactcctcctgttttctggaccgaagtg
ttttcaaaacccgatggacgatggcttcctgtcgatcccatacggaatattgtgaacaag
cgcaaagtttttgacccgacaccatcatctataaatacgcctccgaacgctgccaagcca
tctagaacccagcaaaatgcggaaaatcgcctcttatatgtattagcctttgaggaagat
ggctttgctagggacgttactcgacgttatgcgagagattacaataccaaggtcgtgaaa
gcccaaggtggcagcggagctgcgaacatggggggtcgaagggcttggtggggtcatgtt
ttgagtattgttcaccgcccatatcgtttgcatcgagatgacatcgaagacgaagaactt
gagacagctcaaatgcttgaagggatgccaacgactatgacaggattcaaagatcatcca
gtctacgttctgatacgacatctcaaacaaaatgaaactttatacccaccacctccctct
acccccgaacttggtaaattccgcggagaacccgtttatccgaggtctgctgttgtgtcg
ttgaagactgcggaaaattggatgaggaatgaaggtcgtactatcaagactggtgaacaa
cctttgaagatggtgaaagttcgtgctgggacagtgaataaacttcgggaattggaggtt
ttgaaggaagctggaggtagtggggagggtaatttgggagatgctatgcaagggctttat
gcgcgtttgcaaacggaactttatataccggatccggtggttgacggaattataccgaaa
aataattttgggaatatagatctctatacaccctcaatgctccctcaaggcgcagcgcat
atcccttataaaggtgtcgcgaaggtagcaagaaaattagggttcgatttcgctgaggct
gttactggctttgagtttaaaaagcgacgagcgtatccggttctagaaggtgtagtcatt
gcaaaagaaaatgaagatgctttactagaagcgttttgggaatctgaacggatagcggag
gcgagagctcaagttaaacgtgaagaaagagtacttaaacaatggaaacggttgattcaa
ggacttcggattcgacaaaggttacaagaacaatatggaacaacaccaggtgtagtagga
gaaggagggggagctgataaaggacaagaaggtaaagtcgagatttcgcgtcgtgacgac
aaccataatgccaaggaaccatctgaacatgaccacaacgacttcatcgaagctgacgac
gtagttcaagcctttcatctccctaaattccaacatgtccctgacgctcctgtcgtatca
tttcatcatcaacactcttcgaaaccattagaaagaggagaagaaaacttgatgagggcc
atacccgatttcatgacttacgatctcgacaatgaagacgagcatcgtcatatcatacca
ctcaatctccgagacgccagtaacaacaacaacaataagactactgaaaatcccgctctg
atgatgatccctaaaaccatggctcaattcgcagaagacgccgcggcacaacaagaagtg
gatcttcaggttcatatagaagacataacaacaagtggtggcgtaaatggcaatgaagtt
gaaagtttgaggaggggtaaggtacggaaattgagttcttccgcggccccgactatgaat
gtgaggataatgggacagagacatcggaatatgcgcggtagaacaacaatgggaggtagg
aaacggaaacaaggagatgaagatgattttcttagtgacgatgatgatgatgaagatgaa
tcaaagaggacaaccaaccctacatctacatctaccactaccactactcggaaacgaaga
aagaaagatgttcctgtgtccacgaggacgttacgtccacggagatcaaagagcgttgtc
gtgtatgctgagaatcctgatgatgatgacgacgatgaaggatag
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