Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT43493
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Entry
AGABI1DRAFT43493 CDS
T03136
Symbol
AGABI1DRAFT_43493
Name
(RefSeq) hypothetical protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abp03009
]
AGABI1DRAFT43493 (AGABI1DRAFT_43493)
Enzymes [BR:
abp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGABI1DRAFT43493 (AGABI1DRAFT_43493)
Ribosome biogenesis [BR:
abp03009
]
Eukaryotic type
Pre-60S particles
Helicases
AGABI1DRAFT43493 (AGABI1DRAFT_43493)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18829499
NCBI-ProteinID:
XP_007331917
JGI:
Agabi_varbur_1_43493
UniProt:
K5X317
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
LLPEWASYSLHPQLLHALYRKGFESPTSIQAAAIPVAVKGKDVVGVAQTGSGKTLAYGIP
ILHYLLSQPRPHPNKRRPVKALILAPTRELALQVSSHLNECLNPTDRDTSATQNENNPDE
AQGKNEPTGNQKGKRKKAVHNLPVKKRPPHVSVAAIVGGMSAQKQRRIIDRGVDVLVGTP
GRLWDIIGEDDSLAKELKNLRFLVLDEADRMIESGHFAELENILRLTLREDRCDVWRGDE
IPVEYNAMDTNTNEEQKPNTVYDLQTFVLSATLSKDLQRNLKKRWRPKDYKKRKGKNDKP
ATTLDDLLLRLDFRDPEPEIIDLSPEGKVVSTLQEAKIECLVNEKDTYLYYFLLRHPGRS
LVFLSSIDGVRRLMPLLGLLSIKVFPLHSQLEQRQRLKNLDRFKSTPNSVLLATDIAARG
LDIPAVDHVVHFQIPRTADSYIHRSGRTARAMNKGFSMLVIGPDERRVVKALMGSLSRDE
RDIPELSVDLNMLDKLKERVQLARQIEQRQHQVQKNNYEKNWVKETAEALGVDLDSDYVS
ESDDDKSTNRQRKTQESKTFALKAQLKAMLAQPLVARGISTRYITSGSRPIVDDLLSGES
MYSSWYLYNLYLDKIGILVAHEVLLGLKKAEAGSELVLKKRKKKTKASRDGVNIKEEDEA
QPEDSEVTSS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
cttctaccggaatgggcttcgtactcgctgcatccacaattgttacatgcgctttacagg
aaaggtttcgaaagtcctacatccatccaggcggccgctataccagttgcagtaaaaggc
aaggatgtcgttggtgttgcccaaaccggctctggtaaaacattggcttacggtatcccg
atcctccattatctgctatcccaacctcgaccacatccaaataaacgacgacctgtgaaa
gcattaattctcgctcctactcgtgaactcgcactgcaggtttcatcgcacctcaacgaa
tgcctcaacccgactgatcgtgatacttcagctacccaaaatgaaaacaacccagacgag
gcgcaaggaaagaatgagcccacagggaatcaaaaaggaaaacggaaaaaagcagtgcac
aatctcccggtcaaaaagcgtccgcctcacgtcagtgtagcggcgattgttggagggatg
tcggcccagaaacaacgtcgaatcatcgatagaggtgttgacgttctcgtgggtacgcct
ggtcgactatgggatatcataggagaggacgatagtctggccaaagaattgaaaaacctt
cgcttccttgtactggacgaagctgatcgtatgatcgagagtggccattttgctgaactg
gaaaatatccttcgtttgacgctccgtgaagacaggtgcgatgtttggagaggtgatgaa
attccagtcgaatataatgccatggacaccaatacgaatgaggaacagaaacctaatacc
gtctatgacttgcaaacatttgtgctgtcggctacgctcagcaaagatcttcaacgtaat
ttgaaaaagcgttggcgacccaaagattataagaaacgcaaaggcaagaacgataaaccg
gctactaccttagacgacctcttattgcgactcgattttagagatcctgagcctgagata
atcgaccttagtcctgaaggcaaggtcgtgtctactctacaagaagcaaaaattgaatgc
ctggtgaatgaaaaggatacctatctttattatttcctccttcgacacccaggccgctcg
ctggtctttctatcctcgattgatggcgtcaggcgtttaatgccgcttcttggccttctg
tcgataaaagtcttccctctgcattcacaacttgagcaacgacaaagactgaagaatctt
gatcgtttcaaatcgactcccaactcggtacttttagccacggacattgctgctcgaggc
ctcgatatccctgctgtggaccacgtcgttcatttccaaatacctcgcacagcggattct
tacattcatcgcagtgggcgtaccgcccgtgcaatgaacaagggatttagtatgctcgtg
atcggccccgatgaacggagggtagttaaggcgcttatgggcagtttgtcccgtgatgaa
agagatattcctgagctctcagttgatctcaatatgctggacaaactcaaagaacgagtg
caacttgcgagacagattgaacaacggcagcaccaggttcagaaaaacaattatgagaag
aattgggttaaagaaactgctgaggcgctgggtgtagatttagattcagattacgtgagt
gaatcggacgacgataaatcaaccaaccggcaacgaaaaactcaggaatccaagaccttt
gcacttaaagctcaattgaaggccatgcttgcacaacctctcgtcgcgaggggcatatcg
acgcgctatataacttctggtagccgacccatcgtagacgacctattatctggagaaagt
atgtattccagttggtatctgtataatctgtatcttgacaagatcggtattcttgtagct
catgaagtattgttgggattaaagaaagcagaagcagggagtgaattggtgctgaagaaa
agaaaaaagaaaacaaaagcatcacgcgatggagtcaatatcaaagaagaggacgaagcg
caaccagaagatagcgaggttacaagtagttaa
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