Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT54902
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Entry
AGABI1DRAFT54902 CDS
T03136
Symbol
AGABI1DRAFT_54902
Name
(RefSeq) hypothetical protein
KO
K12828
splicing factor 3B subunit 1
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI1DRAFT54902 (AGABI1DRAFT_54902)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT54902 (AGABI1DRAFT_54902)
03036 Chromosome and associated proteins [BR:
abp03036
]
AGABI1DRAFT54902 (AGABI1DRAFT_54902)
Spliceosome [BR:
abp03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
AGABI1DRAFT54902 (AGABI1DRAFT_54902)
Complex B
AGABI1DRAFT54902 (AGABI1DRAFT_54902)
Complex C
U2 SnRNP specific factors
AGABI1DRAFT54902 (AGABI1DRAFT_54902)
Chromosome and associated proteins [BR:
abp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
AGABI1DRAFT54902 (AGABI1DRAFT_54902)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
HEAT_2
HEAT
Vac14_Fab1_bd
Htt_N-HEAT_1
Adaptin_N
XMAP215_CLASP_TOG
DUF3110
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
18830101
NCBI-ProteinID:
XP_007327209
JGI:
Agabi_varbur_1_54902
UniProt:
K5Y1Y5
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MSRSDSPRLLDSFTAPKEVLDEFAEMAEEENVDPFAETAKTRQIAARQSDYHHRRFNRVA
VDSADAFGAKEGEDVEGGYKDAMRLARLEQEEQRVQQAIEDKKRQEREEGKMKMDLDKTP
PAAELEDVAKELAAAKELALAQQHEAAGSKRKRRWDVETNDENKDPNQRDSGEWSKEAIE
ASAPKKRRSRWDATPAEVSAETPKKSRWDQTPVAQDAPMTQIIMNTPGINHDDKHNRYLS
DEELDALLPTSGYAIVTPPPGFAPAINPRKFMAPAVTEVGGFHIQESSDAAAVAAAAGLA
PELPTEIPGVGNLAFFKPEDAQYFAKILKEEDETELTVDEMKERKIMRLLLKIKNGTPPV
RKTALRQITDKAREFGAGPLFDKILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYV
HKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLAHMISTMRPDIDHADEYVRNTTARA
FSVVASALGIPSLLPFLKAVCRSKKSWQARHTGIRIVQQIAIMMGSAVLPHLRNLIDCIS
HGLTDEQQKVRTMTALGLAALAEAAAPYGIESFDNVLKPLWLGIRLHRGKGLAAFLKAIG
FIIPLMDPEYASYYTKEVTVILIREFQTSDEEMKKIVLKVVKQCAATEGVTPQYIKQDIL
PDFFKAFWVRRMALDRRNYRQVVETTVELAQKAGVSEIVGRVVNELKDESEPYRKMVMET
ITKVVATLGASDIDERLEVRLVDGIIYSFQEQTTEDQVMLDGFGTVVNALGIRVKPYLTQ
IVSTILWRLNNKSAKVRQQAADLTSRLAIVIKQCGEDQLLSKLGLVLFEQLGEEYPDTLG
SIIAAVGAIANVVGMTQMNPPVKDLLPRMTPILRNRHEKVQEASINLIGRIADRGAEFVP
AREWMRICFELLDLLKAHKKGIRRAAVNSFGYIAKSLGPQDVLSVLLTNLRVQERQSRVC
STVAIAIVAETCGPFTCIPAILNEYRTAELNVRTGCLKALSFVFEYVGPQSAYYCDSVVT
MLEDALTDRDLVHRQTASTIVKHLALGVAGLGCEDSMLHLMNLVWPNCFETSPHVIGAVM
DAVEAMRVTLGPGILLSYTLQGLFHPARKVREVYWRVYNALYLGASDALVPFYPDLGELS
EGQNVYDRHALQAFI
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcagactcaccaaggctccttgactccttcacggcgcctaaggaggtgctc
gatgaatttgctgagatggcagaggaggagaacgtcgacccttttgcagaaactgcaaaa
acgcgacaaattgctgcccggcagtcggactatcatcaccgtcgtttcaatcgtgttgct
gtcgacagcgcggatgcgttcggcgcaaaggagggtgaagatgtggaaggtggttataaa
gacgctatgaggttggcaaggttggagcaagaggagcagcgagttcagcaggctattgag
gacaaaaagagacaggagcgagaagaagggaagatgaagatggacttagacaagacgcca
cccgcggctgaacttgaagatgttgctaaagagttggcggcagcaaaggaactcgctctg
gctcaacagcacgaagctgcgggttcgaagaggaaaaggagatgggatgtggagacaaac
gacgaaaataaagatcccaaccaacgcgattcaggtgagtggtctaaggaagccatagag
gcctccgcaccaaagaaacgtcgctccagatgggatgctactcctgcggaagtttctgct
gaaacacccaagaaatcgcgttgggatcaaacccccgttgcacaggatgctccgatgaca
caaatcatcatgaacacgcccggaatcaatcatgacgataaacacaatcggtatctttcg
gacgaagagcttgacgctctccttcctacctccggatacgccattgtgacgccccctcct
ggatttgctcccgccatcaaccccaggaaatttatggctcccgctgtcaccgaagtcggc
ggtttccatattcaagaaagctctgatgctgctgccgttgccgccgccgctggcctggct
cctgaactaccaactgaaattcctggtgtcggtaatttggcgtttttcaaaccagaggat
gctcaatacttcgccaaaatcttgaaggaagaggatgagacggagcttactgttgatgaa
atgaaggaaaggaagattatgcggctactcctcaagatcaaaaatggcacacctcccgtt
cgtaaaacagcccttcggcaaatcactgacaaagcccgggagtttggtgctggtccactg
ttcgacaaaattctacctctcctcatggaacgcacgcttgaagatcaggagcgccatcta
cttgtcaaggttattgaccgtgtgctatacaaacttgacgatcttgttcgcccctatgtg
cacaaaattctcgtcgtcattgaacctctgcttattgacgaagattattatgcccgtgtt
gagggtcgtgaaattatctccaacctatctaaagctgcggggcttgctcacatgatatct
accatgcgccctgatatcgatcacgccgacgaatatgtccgtaacacgactgcgcgtgcc
ttctccgtcgtggcctccgctctgggtatcccatcactccttcccttcttaaaagctgtt
tgtcggtcaaaaaagtcatggcaggctcgccatactggaattcgaattgtacaacagatt
gcaattatgatgggaagtgcagtcttaccgcatcttcgcaacctcatcgattgtatttct
cacggtctcactgatgagcaacaaaaagtcagaacgatgactgctttgggtctcgccgct
ttagcggaagcagccgcaccatacggtatcgagtctttcgataatgtcctgaagcccttg
tggcttggtattcgtctacaccgtggcaagggcttggctgctttcttgaaagctattggt
ttcatcattcccctcatggatcctgaatacgcatcatattacaccaaagaagttactgtc
attcttatccgcgagtttcaaacctctgacgaagaaatgaaaaaaatcgtgctcaaggtc
gttaagcagtgcgcggcaacagagggtgtcacacctcaatatattaagcaagacattctt
cccgactttttcaaagcattttgggttcgccgtatggctcttgatcgtcgtaattaccgt
caggtcgttgaaaccaccgttgaactggcgcagaaggctggagtgtcagagattgtcggg
cgtgtcgtcaacgaactgaaggatgagtcggaaccttacagaaagatggttatggagacg
ataaccaaagtcgtcgccactctcggggcttcagacatcgatgaacggttggaagttcga
cttgtcgatggtatcatctattccttccaagaacagacaacggaagatcaggtgatgctt
gatggtttcggcaccgttgttaacgctttgggaattcgtgtcaaaccctatctcactcag
atcgtctcaaccatcctctggcgtctgaacaacaagagtgccaaagtccgtcagcaagct
gctgatttgactagccgactggctattgtcatcaaacaatgcggtgaagatcagcttctt
agtaaacttggcctcgtgttgttcgaacagttgggtgaagagtatcctgacactcttggg
agtattattgccgctgttggagctatcgcgaatgttgttggtatgacacaaatgaatcct
cctgtcaaagaccttcttcctcgtatgacgccaatcttgcgcaacagacatgagaaggta
caagaagcctccatcaacttgattggccgcatcgccgatcgtggggcagagtttgtgcct
gctcgagaatggatgcgtatttgtttcgaattgctcgacctactcaaagcccacaagaag
ggcatccgtcgtgctgccgtcaactcgtttggttacattgctaagagtttgggacctcaa
gacgtgttgtctgttcttctcactaatcttcgtgtccaagaacgccagtctcgtgtgtgt
agtactgttgccattgctattgtcgcggaaacttgtggacctttcacgtgcattcccgct
attctcaacgagtatcgtacagccgaactcaatgttcgtacgggctgtctcaaagcctta
tcattcgtcttcgaatatgtgggcccacaatccgcgtattactgcgactctgttgttacc
atgcttgaagatgcgttgacggaccgtgaccttgttcacagacaaacggcaagcacgatc
gtgaagcatctcgctcttggggttgctggacttggttgcgaagactcgatgctccacctt
atgaacctcgtatggccaaactgtttcgaaacatctccgcacgttattggtgcagtcatg
gatgctgttgaagccatgcgagtgacgcttggcccaggcattttgttgagctatacgcta
cagggactgttccaccctgctcggaaagtgcgagaagtttactggagagtttacaatgct
ctgtatcttggcgcgtcagatgccctcgtaccattctatcccgacctcggagagttgagt
gaaggacaaaatgtttatgatagacatgctttgcaggccttcatttag
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integrated database retrieval system
