Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT57378
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Entry
AGABI1DRAFT57378 CDS
T03136
Symbol
AGABI1DRAFT_57378
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGABI1DRAFT57378 (AGABI1DRAFT_57378)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT57378 (AGABI1DRAFT_57378)
Enzymes [BR:
abp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AGABI1DRAFT57378 (AGABI1DRAFT_57378)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
AGABI1DRAFT57378 (AGABI1DRAFT_57378)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
BSP_II
Motif
Other DBs
NCBI-GeneID:
18830213
NCBI-ProteinID:
XP_007328919
JGI:
Agabi_varbur_1_57378
UniProt:
K5VZR9
LinkDB
All DBs
Position
Unknown
AA seq
1750 aa
AA seq
DB search
MNIAHSIPSTITSVSFSFLSTQDIRRISVKQIVNPVLLDDLNRPNIGGLYDPALGPSDRS
DICATCHLTYFTCPGHYGHIDLPAPVFHPLFMGNMYNLLRGCCMFCHRFKMSRTVLCQYV
AKFRLLERGLLEAAHCVDDLQIRERKKKSKSRSREDEDEGADTTMGTDVPDETPQQFMAR
INLYVAIHLSRAKGNTRDNYKDALVYQARKELVNDFLKNTILKKCQNGDCSSAGYTYRKE
GHTKIVEYDLSAKQKGSLMRKRPDVLLAEKTGNFMAIQQLRPSTDSDVEMDGSQAVESDE
EEDEEEEEDEEDAEVVDLGKGMFDTDAREGQLPRAVSGRVKTARGRNERVVAPEECRAHL
RRLFRNEAVVCSLIFGRHGPFAPLSFGDLSLASADMFFMDVIPVSPTRFRPPAKLGDTLF
EHPQNELLARVLTTSYRMRDVNVELRSLQEKKDVPVDEGQRKQLLASLLERLVQLQVDVN
SFIDSSKNPQPVRQGKLPPAGVKQGLEKKEGLFRKHMMGKRVNYAARSVISPDVNIEPNE
IGIPPVFARKLTFPEAVTPSNFHEMRQRVITGPHGYPGATMVEYEDGHQQSLDKLTVEQR
TAIANQLLTPQEGDRTVAGRKGLHTRTPAINKKVYRHLKDGDALILNRQPTLHKPSMMVH
KAKVLQGEKTIRMHYANCNSYNADFDGDEMNIHFPQNHVARAEAMMIANTDNQYLVPTSG
NPLRGLIQDHVVAGVWMTKQDSFFTREDYFQLIYGALRPEDEDYCTTGRLETLPPTIWKP
KPLWTGKQIISTILKNLTPPKFKGLNLDAKTKVPGFLWGKDSKEDKVVFMDGELLCGVLD
KAAFGASDYGLVHSVYELYGADVAGKLLGTLSRLFTKFLQHRAFTCRMDDLILTPEGDRK
RVELLEKGRNWGTEAAIENFPSLKDTAPEEIPVALEALLLNVLRDDKKMAGLDMTVKTKL
SKLTSSVSDACLPHGLLRKFPHNNMQTMTQSGAKGSAVNARQISCGLGQQELEGRRVPVM
VSGKTLPSFRPFETKAIAGGYVASRFLTGIKPQEFYFHCMAGREGLIDTAVKTSRSGYLQ
RCLIKHLEGIHVHYDHTVRGSDNSIYQFAYGGDALDVTKQKHLYQFDFIAQNEESLVMRL
QPMRVADAVDDSTAISYMKKVLKRSTDRKRRGEPSKRDKYDPALTLYSPSRFLGATSEQF
AVAVDQYMKSNPNDLLTKKGDDEEALRRRHEKMLAYNFKMIMNVKYMRSLVEPGEAVGLL
ASQGVGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIVMTASQKPKTPSMSMLVRESVSQ
AEIDLFCKRASRVALSQLVEDVVVREISKVEGGARRTVFSIDINFFPEEEYTSEYDLGPF
DLLNAFSIRFPMILKKEIANEMKKLDADLKSQIAELGKGKKSSTREGGDGDAEDEEEEGP
RKKRGGDDESEAGDGDADDEKRARQKKQQATYESDEDQSEDEGEEGEGEFDDADIEAAYA
EDDDMDIDSDKKKRKKKKVSSLDDEVSRVSEMFMKHLQHATSFTFNSSRCTLELEFTTDM
PKLLFVGIVERTCRATVIREIPGITECFQIKDDSKKGQEPEIKLTTNGSNFRGMWKFAVQ
SGESILRDDEIYSNDIYAILMTYGVEMARAAILREMGGVFGAYNIQVDRRHLELIADYMT
FEGGYKPFNRKGISANPSPLLKASYETTAAFLSDATLYGDFDDLSTPSGNIVIGRPNATG
TGVFDVVMPV
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcacattccataccttccactatcaccagcgtcagcttttcctttctctca
acgcaagatattcgacgtatttctgtgaaacaaattgtcaaccccgtacttcttgatgat
ctgaaccggccaaacatcggcggtctttatgatcctgctctaggaccaagcgatcgctct
gacatctgtgctacttgtcatcttacttatttcacctgtccaggacactatggacacatt
gaccttcccgctcctgtatttcacccgctatttatgggaaacatgtataacctcctccgg
ggatgttgtatgttttgccaccgatttaaaatgagcaggacggtgttatgccaatatgtt
gccaagtttagactattagaacgaggactgttagaggcagcgcactgtgttgatgactta
caaatacgggagcggaagaaaaagtcgaaatcaagaagcagagaggatgaggatgagggt
gcagatacaacaatgggcacggatgttcctgacgaaacaccccagcaattcatggcgcga
atcaatctctacgttgcgatacacttatctcgggccaaaggcaacactcgtgataattat
aaagatgctctcgtttaccaggcccggaaggagttagttaatgacttcctcaaaaatacc
attcttaaaaaatgtcagaacggtgattgtagcagtgcagggtatacatatcgcaaagaa
ggccacaccaaaattgtcgaatacgacctctcagcgaaacaaaaaggctctctcatgaga
aaacgccctgatgttctgctggctgagaagacgggaaactttatggctattcaacaatta
agaccatcgaccgattcagatgttgaaatggatggttctcaagcggtggaaagcgacgag
gaagaggacgaggaagaggaagaggatgaagaggatgcagaggtagttgacctgggaaaa
ggcatgttcgacaccgatgctagggaagggcaattacctagggcggtgagtggtagggtg
aaaactgcgaggggtcgtaatgagcgagtcgtggcacctgaagaatgtcgtgcacactta
cgccgcctcttccgcaatgaagctgtcgtttgttctctcatatttggccgccacggacct
ttcgctcctttgtctttcggggacctcagccttgcttctgctgatatgttcttcatggac
gttatccccgtctcgccgactcgcttccgcccccctgccaagttgggtgacacgctgttc
gaacatccgcaaaacgaactgctagccagagttttgacgacttcgtaccgtatgagggat
gtcaacgtcgaactacgatccttgcaagaaaaaaaagatgtgcctgtcgacgaaggtcag
aggaagcagcttctggcctctctccttgagcggttggtccagctacaggtggacgtgaat
agcttcattgacagcagcaaaaatccacagcctgtacgacaaggcaaactccctcctgct
ggtgtcaagcagggattggagaaaaaagagggtttgttccgcaaacatatgatggggaaa
cgtgtcaactatgccgctcgatcagtcatctctccagacgtcaatatcgaacccaatgaa
atcggaataccacccgtgttcgctcgaaaacttacattccctgaggctgtcactccttcc
aacttccacgagatgcggcagagggttatcactggtccacatggatatcctggtgccacc
atggttgaatatgaggacggccaccagcaatcgttggacaaactcactgttgaacaacga
acagccatcgcaaatcaattgcttactcctcaagaaggtgatcggacggtggcgggaagg
aaaggtcttcatactcgaacacccgccataaacaagaaagtgtatcgacatctgaaagac
ggggatgccttaattctgaatcggcagccaacgttacacaaacctagtatgatggtgcac
aaagcgaaagtacttcaaggagagaagaccatccgtatgcattatgccaactgtaactcc
tataacgctgatttcgatggtgatgaaatgaatattcattttcctcaaaaccatgtcgct
cgtgcggaagccatgatgattgccaataccgacaaccaatacctcgtaccaacctccggc
aatccattgcgtggtctaattcaagatcacgtcgttgccggagtgtggatgacaaaacaa
gattccttctttactcgggaagattatttccagctcatatatggagctttgagacctgaa
gatgaggattattgtacgactggcagactggaaacgctaccgccaacaatttggaaaccc
aaacctttatggacgggaaagcagattatctcgaccatccttaaaaatcttaccccacca
aaattcaaaggccttaatttggatgccaaaaccaaagttccaggcttcctttggggcaag
gattcaaaagaggacaaggtcgtgttcatggatggtgagcttttgtgtggtgttcttgac
aaagcagcctttggtgccagcgattacggcctcgttcactctgtatatgagctctacggg
gcagatgttgccgggaaacttctcggtactctgagtcgcttgttcactaaatttcttcaa
catcgagccttcacgtgtagaatggacgatttgatccttacacctgagggggatcgcaaa
cgtgttgaactcctggagaaggggcgaaactggggaacggaagctgctatcgaaaacttc
ccgtctctcaaggatacagcaccagaagaaatccccgtggcattggaggcacttctattg
aatgttttgcgcgacgataaaaaaatggctggtcttgatatgactgtcaaaactaaactt
tccaaactcacttcttcagtctcggatgcttgtctgccacatggattattgcgcaagttc
ccgcacaataacatgcagactatgacccaatccggtgcgaaaggttctgcagtcaatgct
cgacagatatcctgtggtctgggtcagcaagagttggaaggccgccgtgtaccagtcatg
gtcagtggaaagacgcttccctctttcagacctttcgagacaaaggctattgctgggggc
tatgtcgcgagtcgattcttgactggtatcaaacctcaggagttttattttcactgtatg
gctggacgcgagggtcttatcgatactgctgtgaagacttcccggtctggttatcttcaa
cgctgcctcatcaagcacctggagggcattcacgtgcactatgaccatactgttcgcgga
agcgataactctatatatcaattcgcgtatggtggagacgccttagacgtgacgaagcaa
aaacatctatatcaatttgacttcatagcacagaacgaggagtcgctggtgatgcgctta
cagccaatgcgcgtagcagatgcagtagacgactcgacggcgatatcatatatgaaaaaa
gtccttaaaaggtcaacagatcggaaacgaagaggagagccgtcgaaaagggacaagtat
gatcctgcgttgacgttgtatagtccaagtagatttctgggtgcgacgtcggagcaattc
gcggtggcagtggatcagtacatgaagtcgaatcctaatgatctattgacgaagaaagga
gatgacgaggaagcactgcggaggagacatgagaagatgctggcgtacaactttaagatg
atcatgaacgtcaagtatatgcgaagcctggtcgaacctggcgaagctgtcgggttgttg
gcttctcagggtgtgggcgaaccctcaacacagatgactctcaataccttccattttgct
gggcacggtgcagctaatgtcaccctcggtattcctcgactacgtgagattgttatgact
gcatctcaaaaacccaagacgccttcaatgagcatgcttgttcgtgagagcgtctcccag
gccgagattgacctcttctgcaagcgcgccagtcgggtcgctctatctcaacttgtcgaa
gatgtcgttgtacgcgaaatatccaaggtagagggaggtgcacgccgaacggtgttcagc
attgatatcaacttcttccctgaggaagagtatacctcggagtatgatcttggaccgttt
gacctcttgaatgccttttcaatccgatttcctatgatactgaagaaagaaatagccaac
gagatgaagaagttggacgcagatctcaaaagtcaaattgcggaactagggaaggggaag
aaatcttctacaagagagggtggggacggagatgcggaagatgaagaggaggaagggccg
agaaagaaacgagggggtgacgatgagagtgaggctggcgacggtgatgcggacgatgaa
aagagagcgagacaaaagaaacaacaagccacgtatgagagtgacgaggatcaaagcgag
gatgagggcgaggagggcgagggagagtttgatgatgcagatattgaggctgcttacgct
gaagatgatgacatggacattgacagtgataaaaagaagaggaagaagaaaaaagtatct
tcacttgacgatgaagtcagccgggtatcggaaatgttcatgaaacacttgcagcatgcg
acgtcgttcacttttaattcgtctcggtgtacgttggaacttgagttcaccactgatatg
ccaaagctgttatttgtcggcattgttgaacgaacgtgtcgagcaactgtcatccgtgag
atcccagggattacagagtgtttccagatcaaagatgacagcaaaaaggggcaggagccc
gagatcaagcttacgactaacggatccaatttccgtggcatgtggaaattcgcggtacaa
tcgggagagagcatcttgcgggacgatgaaatttattcaaatgatatctatgcgatacta
atgacatatggggtggagatggcgcgagcggctattttacgggaaatgggaggcgttttt
ggagcgtataatatccaggtggacagacggcatcttgaattgatcgccgattatatgact
ttcgagggtggctacaagccgtttaatcggaagggcatttcggcgaatccatcacccctg
cttaaggcgtcatacgaaacgacggctgcattcctttccgatgcgacgctctacggagac
tttgacgacctctcgacgccgtctgggaacattgtcatcggacgaccgaatgccacggga
acgggggtgtttgacgtagtgatgcccgtgtaa
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integrated database retrieval system
