Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT60232
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Entry
AGABI1DRAFT60232 CDS
T03136
Symbol
AGABI1DRAFT_60232
Name
(RefSeq) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI1DRAFT60232 (AGABI1DRAFT_60232)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT60232 (AGABI1DRAFT_60232)
Enzymes [BR:
abp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AGABI1DRAFT60232 (AGABI1DRAFT_60232)
Spliceosome [BR:
abp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
AGABI1DRAFT60232 (AGABI1DRAFT_60232)
Complex C
U5 SnRNP specific factors
AGABI1DRAFT60232 (AGABI1DRAFT_60232)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
PhoH
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
18830315
NCBI-ProteinID:
XP_007330391
JGI:
Agabi_varbur_1_60232
UniProt:
K5WUC7
LinkDB
All DBs
Position
Unknown
AA seq
2111 aa
AA seq
DB search
MGSRVVRAAPKDLEKKKRKAAESHEHAEKPARRKAEGAGFGPADIIESTQGVEGLTYRPR
TLETREVYELMLSSVHTALGDQAQDIVRSAADAVLESLKSDALKDFDKKREIEDVLGPIT
GEQFSQLLNLSKKITDYNADDEVVADVDMERKDAEIDGEVGVAVVFDEEEQEEEEDEGYE
IKDESDGEEEEEDEGDEEDATGEEAPGEEGMVIGGEGRDKARKAQKDIISPHTVDGFWVQ
RQVSEIYPDPVTAADKAASVLSILGSESNLRDCENQLMELFDYQSHHIIQIFIKNRDVVV
WCTKLMRSDADERVNVEVAMREKGVGWILRELAGGQDKKKTTDDMDVDEAAKTEVPKTAT
LAPGSTVQPKRVVDLESLAFSQGGHLMSNKKCKLPDGSFKRSKKGYEEIHVPAPKSKPVT
DNELVPVSSLPAWAREAFTVPRLNRVQSKLFPVAFGTDEPILLCAPTGAGKTNVAMLTIL
NELAKWRDEETGQFDLDGFKIIYVAPMKALVQEMVGNFQARLKVFGVKVGELTGDSQMTK
QQIAETQIIVTTPEKWDVITRKSTDTSYTNLVRLVIIDEIHLLHDDRGPVLEAIVSRTIR
RMEQTNEYVRLVGLSATLPNYQDVATFLRVDEKKGLFYFDATYRPCALQQQFIGITEKKA
IKRYQVMNEVCYEKVLDQAGKNQTLVFVHSRKETAKTAKFLRDMAMEKETITQFVKAEGA
TREILTEESSNAKDRNLVDLLPFGFAIHHAGMSREDRTLVEDLFSEGHVQVLVCTATLAW
GVNLPAHTVIIKGTQIYNPEKGRWVELSSQDVLQMLGRAGRPQYDTFGEGVIITNHQELQ
YYLSLLNQQLPIESQFVAKLADNLNAEVVLGTIRNRDEAVQWLGYTYLYVRMLKDPGLYS
VGVDYQDDAGLVQKRADLIHSAAVMLEKCQLLKYERSSGRFQSTELGKIASHYYVTYNSM
LVYNKHLKPSMSTLELFRVFALSNEFKLIPVRQEEKLELVKLLERVPIPVKEGVEEPAAK
INVLLQAYISQLKLDGFVLVADMVFVQQSAGRILRAMFEICLKRGWAVPAKAALDLCKMV
EKRMWGSMTPLRQFRGVPTEVVRKAEGKQFPWYRYFDLTPPEIGELIGIPNAGKLVHRLV
HSFPKLQLSAQVQPITRSLLRIDLSIIPDFRWDEKIHGAAETFIILVEDVDGEVILFHDN
FVLRQRYAEDEHNVTITVPMSEPVPPNYYISIISDRWLQSETRLPISFKHLILPAKFPPP
TALLELQRLPISALHNKEFETIYESTVTDFNKIQTQVFQALYMSDENVFVGAPTGSGKTV
CAEFALLRLWSKREQPRAVCIEPFQEMVDQRVEEWKRKFGKLQGGKEIVGLTGETSADLR
LLEKADVVVCTPTQWDVLSRRWRQRKNVQNIGLLIADEIQQVGGEVGPTYEVVISRTRYV
SFQTKVQTRIVACGVSLANAEDLGEWIGAKSHTIFNFSPNARPLNMEIHIQSFTIPHFPS
LMIAMSKPAYLAILEYSPSKPVIVFVPSRRQCRLTVDDLVTHCAADDDPERFLYTELDKL
QPHLDHLSDKGLIETLKHGIGYYHEALSRQDKIIVQRLFESGAIQVLVASKDTAWSLPVA
SHMVIIMGVQSYEGKEHRYVDYPVMDVLQMMGRACRPQEDTDSRCVLMCQQTRKDFYKKF
LAEGLPIESHLPTHLLHDYFLAEIAVKTIENKQDAMDILTWTYFYRRMTQNPNYYNLHNV
SHQHLSDHLSELVENTLNDLVNSKCISIEDEMDVSALNLGMIAAYYNISYVTVEVYTLSL
KERTKLKGLLEVVSSSAEFETIPIRRHEDVLLRRIYDRVPVKLDRADFEAPHFKTFLLLQ
AHFSRLQLPPDLAADQTLILEKILNLLSACVDVMSSNAWLNALGAMDLSQMCVQGVWEKD
SPLKQIPHFEPDVIQRCKEADIETVYDIMEMEDDDRTKLLQMSSTQMRDVAMFVNSYPTL
DVSYDLAKGDYTAGAPILMKVTLARDIDDDDDESDQTVVAPFYHSKKLANWWVVLGDRDS
RQLYVIKKVTVTKNLVVKLEFTLPKGTHRPRLYVVCDSYVGADHDIELEPIEVAEGEESD
SDEEMDSDDDE
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcgagtcgtccgtgctgccccgaaggatctcgaaaagaagaagcggaaagcc
gcagagtcacacgaacatgccgaaaagccagccaggcgcaaggctgaaggcgccggtttt
ggtcccgccgacatcatcgaatcgacccagggcgttgaaggtttaacgtaccgacccaga
acattggaaacgcgcgaggtctacgagctcatgctctcctcagttcataccgctctaggt
gaccaggcccaggacatcgtccggagtgctgctgatgctgtcctcgagtcattgaagagt
gacgcgctcaaggatttcgacaaaaagcgcgaaatagaggacgtccttggtcctatcacc
ggcgagcagttctcccaactcctcaacctgtcaaaaaagattaccgactacaacgccgat
gatgaagtcgttgccgacgtcgatatggagcgcaaagatgctgagattgacggcgaagtc
ggcgttgctgtcgttttcgacgaggaggagcaggaagaagaggaagacgagggttatgag
atcaaagacgagtcggatggcgaggaagaggaagaggatgaaggtgacgaagaagacgct
accggtgaggaggctccaggcgaggaaggaatggttataggtggcgaaggacgcgacaaa
gcgcgtaaagctcaaaaggatatcatctcccctcatactgtcgacggtttctgggtacag
cggcaagtctcagaaatatacccagaccccgtcaccgccgccgacaaggccgcctccgtt
ctctccatccttggctcagagtcgaacctccgtgactgcgagaaccagctgatggagctt
ttcgactaccagagtcatcacatcatccaaatcttcatcaaaaatcgtgacgtcgtcgtc
tggtgcaccaaactcatgcgtagcgatgctgatgaacgcgtcaacgtcgaggtggctatg
agagagaaaggcgtgggttggattctgcgagaattagctggtggtcaagataagaagaaa
acgacggacgacatggatgtcgacgaggctgctaaaaccgaagtccccaaaaccgctaca
ttagcccctggctccactgtccagcccaagcgcgtcgttgaccttgagagcttggcgttc
agccagggcggccacctcatgtcgaacaaaaagtgcaaactccccgatggttctttcaag
cgctcgaagaaaggttacgaagaaattcacgtacccgctcccaaatctaaacccgtcaca
gacaacgaactcgtccccgtatcctctctccccgcttgggcacgcgaagccttcaccgtc
ccgcgtctcaaccgcgttcagagcaaactcttccctgtcgcctttggtactgatgaaccc
attcttctctgtgcgccgacgggtgccggcaagaccaatgtcgccatgttgacaatttta
aatgaacttgcaaagtggcgtgatgaagagaccggacaattcgacctcgacggcttcaag
atcatctacgtcgctcccatgaaagccctcgtccaggaaatggtcggaaacttccaagcg
cgtctcaaagtcttcggggtcaaagtcggagagttgacaggagactcgcaaatgacgaag
cagcaaatcgcggagacacaaatcatcgttaccacccccgaaaagtgggatgtcatcacg
cgcaagagtacggacacgagctataccaatctagttcgactcgtcattattgacgaaatc
catctccttcatgatgatcgtggcccagtccttgaggccatcgtttcccgtaccatccgt
cgcatggaacagacgaacgagtatgttcgtcttgtcggtctttcggcgaccctgcctaat
tatcaagatgtcgcgactttcctccgtgttgacgagaagaagggtctgttctacttcgat
gccacgtaccgtccttgtgctcttcagcagcaattcatcggtatcacggagaagaaggcc
atcaagcgctatcaggtcatgaatgaagtctgctatgaaaaggttctcgaccaagccgga
aagaatcaaacactcgtattcgttcattcccgcaaagagacggcgaagacggcgaagttc
cttagggatatggccatggagaaggaaacgatcacccaattcgtcaaagccgagggtgct
actcgcgaaattctgacagaagaatcctcgaacgcgaaggataggaatcttgtcgacttg
ttacctttcggtttcgctatccatcatgccggaatgtcacgcgaagatcgcacgctcgtg
gaagatctgttctctgaaggccacgttcaagtcctcgtctgtaccgccaccctcgcttgg
ggtgttaatctccccgcccacaccgtcatcatcaaaggcacccagatctacaaccccgaa
aaaggacgctgggttgagctatcgagtcaagacgtcctgcaaatgttagggcgtgcagga
agaccccagtacgatacgtttggagaaggtgtcatcatcacgaaccaccaagagttgcaa
tattaccttagtctgttgaaccagcagctgccgatcgagagtcaattcgtggcgaagttg
gcggataatctgaatgcggaggttgtgcttgggacgattaggaacagagacgaggcagtt
cagtggttgggatatacatatctgtacgtccgtatgctcaaagacccaggactctatagt
gtgggcgtggactaccaagacgatgctggccttgtacagaagcgcgccgatcttatccat
tcggcggctgtcatgttggagaaatgccaactattgaagtacgaacggtcgtctggcaga
ttccagagtacggagctgggcaaaatcgcgtcgcattattacgtgacctacaactcgatg
ctggtgtataataaacacctgaaaccatcaatgtcgaccttggagttattcagggtgttc
gcgctctcaaacgagttcaaactgattcctgttcgccaagaggaaaaactcgagttggta
aagcttttagaacgcgtaccgattcctgtgaaagagggcgtggaggaacccgccgcaaaa
atcaacgtcctattacaggcctatatatcgcaattgaagctcgatgggttcgttttggtg
gcggatatggtattcgttcaacagtctgctggtcgtattcttcgcgcgatgttcgaaata
tgtttgaaacgtgggtgggcggtccctgcaaaggcagcattagatttatgcaagatggtt
gaaaagaggatgtgggggtctatgacgccactgaggcagttcagaggtgtaccgactgag
gttgttaggaaggctgaaggcaaacaattcccatggtatcgctactttgatctaacgccc
cccgaaattggagagctgattggcatcccgaatgccggcaagctggtgcaccgtctcgtc
cacagcttccccaagcttcagctatcggctcaagtccagcctatcacgaggtcccttctg
cgcatcgacctatccatcatacccgatttccggtgggacgagaaaattcacggcgctgcc
gaaacttttatcattctcgtcgaagatgtggacggcgaggtgattcttttccatgataat
ttcgttctccgtcaacgttacgccgaggatgagcacaacgttacaatcaccgtccccatg
tccgagccagtcccgcccaattactacatttccatcatctccgaccgctggctgcagtct
gagacgcggctaccgatctcattcaagcacctcatcctccccgccaagttcccgcctcct
accgcgcttctcgagcttcaacgcttaccgatttccgcgttacataacaaggaattcgaa
accatctacgagagcacggtgacggattttaacaagattcaaacgcaagtcttccaggct
ttatatatgtctgacgaaaacgtgtttgttggtgcgcccacgggaagtggcaagaccgtt
tgtgcggaattcgcacttttgagattatggagcaaacgggaacagcccagggcggtttgt
atcgaaccgttccaggagatggtggaccagcgagtcgaagagtggaaaaggaagttcgga
aagttacaaggcgggaaagagattgtcggattgacgggagagacgagtgcggacttgagg
ttgcttgagaaggcagatgttgtcgtatgcacgccgacgcagtgggatgtcttgtcgaga
cgatggcgccagaggaagaacgttcagaacattggacttttgatcgcggacgagatccag
caagtgggaggtgaagtagggccgacatatgaggtcgttatatcgaggacgcgctatgtt
tcgttccaaacgaaggtgcagacgcgtatcgtagcttgcggtgtttcgttggccaacgca
gaagaccttggagagtggattggtgccaaatcgcatacgatattcaacttctcgcccaat
gctcgtccgttgaacatggagatccatatccagtccttcacgatccctcatttcccttca
ctcatgatcgccatgtcgaaacccgcttacctcgctatacttgaatattcaccaagtaaa
cccgtcattgtcttcgtaccttcgcgccgccaatgccgtctgactgttgatgatctcgtc
acgcactgtgctgctgacgatgatccagagaggttcctctatacggaactggacaagctt
caacctcacttggaccatctcagtgacaagggattgattgaaacgctgaagcatgggatt
gggtactatcatgaggcacttagcaggcaggataagattattgtgcagcgcttgttcgag
tccggtgccattcaggttcttgtagcgtccaaggacactgcatggagccttcctgttgca
agtcatatggtgatcatcatgggtgtgcaatcatacgagggcaaggagcatcgctacgtg
gattatcctgtcatggacgtcttgcagatgatgggacgcgcttgccgcccacaagaagat
accgatagtcggtgtgttctgatgtgccaacagacgagaaaggacttttacaagaagttc
ctcgcggagggccttccgatcgagtctcatcttcccactcatttgttacacgattatttc
ttggcagagatcgcggtcaagacaattgaaaacaagcaggatgcaatggatatactgacg
tggacgtatttctatcgccgcatgactcaaaatccgaactactacaacttgcacaatgtc
agccatcaacacttgtctgaccatctgtcagaattagtcgaaaacacgctcaacgacctc
gtgaactcgaaatgtatatccatcgaggacgaaatggacgtttccgcccttaaccttggc
atgattgccgcctattacaatatttcttatgtgaccgttgaagtgtatacgctttcgctc
aaggaacgcaccaaactgaagggtttactcgaggtcgtctcctcatccgctgaatttgag
accatccccatccgccgtcacgaagatgtactcctcagacgcatctatgaccgtgtgccc
gtcaaactcgatcgcgccgatttcgaagccccacatttcaaaacattcttgcttcttcaa
gcacacttctcgcgtctacaacttcctcctgatcttgctgcggatcaaaccttgattctg
gagaagatcttgaatctactgtctgcttgtgttgatgttatgtcgtcaaacgcgtggttg
aatgctctgggcgcaatggatctgtcacagatgtgcgttcagggtgtgtgggaaaaggat
tcgccattaaagcagattcctcattttgaacccgacgtaattcaacggtgtaaagaggct
gacattgagacagtttacgacatcatggaaatggaggatgatgatcgcactaagctcttg
caaatgagctcaacgcaaatgcgtgatgtcgcaatgttcgtaaactcgtacccaaccttg
gacgtgtcgtatgatctcgccaagggcgattacacagctggtgctcccatcttgatgaag
gtcactcttgcgagagatatcgatgacgacgacgatgaaagcgaccaaactgttgttgct
ccattttaccattctaaaaagcttgccaactggtgggttgtcctcggtgaccgggacagt
cggcagctgtatgttatcaaaaaggtcactgtgaccaagaacctcgtagtcaagcttgag
tttaccctgccaaagggaacccaccgacctcggctctacgttgtgtgcgattcctacgtc
ggtgccgatcacgatattgaattagagcccattgaagtcgctgagggagaggagagtgat
agtgacgaggaaatggatagtgatgatgatgaatga
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integrated database retrieval system
