Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT67309
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Entry
AGABI1DRAFT67309 CDS
T03136
Symbol
AGABI1DRAFT_67309
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AGABI1DRAFT67309 (AGABI1DRAFT_67309)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abp03009
]
AGABI1DRAFT67309 (AGABI1DRAFT_67309)
Ribosome biogenesis [BR:
abp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AGABI1DRAFT67309 (AGABI1DRAFT_67309)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WDR55
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_HPS5
WDR54
Motif
Other DBs
NCBI-GeneID:
18830653
NCBI-ProteinID:
XP_007325200
JGI:
Agabi_varbur_1_67309
UniProt:
K5X886
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MGTIQKKNTNAKKGKAKENAPVSCSKASPTAGRNGKEIPWEWASITSPAASKVPPIFTRD
GNYFFSLVGSSVQIYSAASGEIVSTLKAPSPQTSTDSQSNNFSCAIVNPHNPFQLITGSL
AGSLMVWDFLDGTLLRTIDIAQPIHLICAHERFKDYVFVAVSRPFKSVKPGNNAVVMRVS
LRNVEASTKSTFLKSAEILAVGKTRFTTGLAISSNGDWLVATAGHKVYVAKTSSLAAGFT
KYVSPERLTCLAFHPSQEYFATGDDKGVIRMWYCLNDGLAVNVKGVEKKTQTSSMHWHAH
AVSALTFTSNGAYLLSGGEEAVLVIWQLHTGRKEFVPRVGSAISTVSVARSKTGEEEYLL
GLTDATYVFVNSSSLRVSRSYSRVKIDPSVYGSVHSLSVATPLAVHTPSSTILLPSSHPS
SLQIYSPSTSTLISELEVSPSNRVSRREDKAAEQSRVEHCVVSPSGRWMATVDAREGDGD
FRAETYLKLWAWNEKNAAWILNTRIDKPHGKNKITSLAFGVEEAEDLPLQLATIGEDGIV
RVWRLRNRKLKGGETEEFWVTRNTLQYHSERPRFVSWSRDGSLLAVSFESCVVVYETSMY
TMLQVLTSPECTNPQSAYFIGGGNLLVQGGTKMVLWNILSHSIVWNHSTERDIHSICPHP
SESSFAVFEKRISNESQSTRISLFSLSSPRPTMVYTLPFTLRNMAWYAEGARSDEFSFLG
ISQNWSLVAFGDTVDLAHEDTSAKELNADAQIRKPTLLQDIFGSSAFVDLANPSRPDRNQ
HHVQLSSKTAEAILDSPAYLTPALNTFYDSLISTFLKKRVIEDLTPSDTVKMDVDDEDEV
GEKEEEKPQMVVKPMSSRTITSSEMRDLVGLFRKHGIQGEP
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggtactatacagaaaaaaaatacaaacgcgaagaagggaaaagcaaaggaaaatgct
ccggtatcttgttcaaaagcttcaccaacagcggggcggaatggaaaagaaataccttgg
gagtgggcatctatcacatctccggccgcaagtaaagtgccccccatttttacaagagac
ggaaactattttttctctctcgttggctcatccgtgcaaatctattcagcggcgtctggc
gaaatcgtgtcaacactaaaggctcctagtccccaaacatcaaccgacagtcaatcgaat
aacttttcgtgtgcaatcgtcaatcctcataatccatttcaactgatcaccggttctttg
gctggttctttgatggtttgggatttcctggatggtactctgttaaggaccattgatatt
gctcaacctatacatctgatttgcgcgcatgaacggttcaaagattacgtctttgttgcg
gtgtctcgtccgttcaaaagcgtcaagccgggaaacaacgccgttgtgatgcgtgtttcg
ctacgaaatgtcgaagcttcaaccaaatcgaccttcctcaaatctgcggagatattggct
gtgggaaagacacgatttacaacgggtttagcaatttcatctaatggtgattggctggtg
gcgaccgcggggcacaaggtttatgtggcaaaaacatcatctctggccgcgggttttacg
aagtatgtatctcccgaacgcctcacctgcttggcattccatccgtcacaggagtacttt
gcaactggtgatgataaaggcgtcatccggatgtggtattgtctaaatgatgggcttgcg
gtcaacgtgaagggcgtagagaaaaaaacacaaacttcttccatgcattggcacgcgcac
gccgtatcagctctaacattcacatcgaatggtgcttatttactaagtggtggcgaggaa
gctgttctagtcatttggcaattgcacactggacgaaaggaatttgtccctcgagtcggc
tcagcaatcagcacagtatcagtagcgagatcgaagaccggggaagaggaatatcttttg
gggcttacagatgcaacatatgtctttgtaaattccagcagtctgagagtttcgagaagt
tattctcgagtaaaaatcgatcctagtgtatacggaagcgttcattccttgtctgtggcc
acacctttagccgttcatacgccatcatccacgattctcctaccgtcgtctcacccttcc
tcactccaaatatactccccttcaacatcaaccttgatttccgaactcgaagtctcaccg
tccaatcgcgtgtctaggcgagaagataaagcagcggagcaatcgagagttgaacactgc
gttgtctcaccgtcaggacgttggatggcaactgtcgatgcgcgagaaggagacggcgac
tttagggcagaaacatacctgaagctgtgggcctggaacgagaaaaatgctgcatggatt
ctcaatacccgaattgacaagccacacggaaaaaacaagatcacatcactggcatttggc
gtcgaagaagcagaggatttgcctttgcaattggctactattggggaagacggtattgtg
agagtgtggcggctgagaaatcggaaattaaaaggcggggagactgaagaattctgggtg
acgcggaatactcttcaatatcattcggaaagacctcggtttgtgtcttggtctcgtgat
ggatcattgctcgccgtgagctttgaatcgtgtgtcgttgtttatgaaacgtccatgtac
actatgcttcaagtcctcacgtcacctgaatgcacaaacccacaatctgcatatttcatc
ggagggggaaatttgcttgttcaaggcggcacgaaaatggtcctttggaatatcttatca
catagcatcgtgtggaatcactctaccgaaagagacatccactcaatatgccctcatcct
tctgaatcatcttttgccgtctttgaaaaacggatttcaaacgaatcacagtcaacgcgg
atatccctcttttctctcagctcccctcgaccgaccatggtatacaccttaccattcaca
ttacgaaatatggcttggtatgcagagggagctcgatccgatgaattttcttttctgggt
atcagccagaattggagtcttgttgcgttcggtgatactgttgatcttgcacatgaagac
acttcggcaaaagaactgaatgcggacgcccaaataagaaaaccaacattattacaggac
atctttggttcttctgcatttgtcgatcttgccaacccgtcaagaccagatcgaaatcaa
caccatgttcaattatcatctaaaactgcagaagcgatattagactcgccggcatacctt
acgccagcccttaacacgttctatgattctttaatctccactttcttaaagaaacgggtg
atagaggatttaactccctctgatactgtgaagatggatgtagacgatgaggacgaagta
ggggaaaaagaagaagagaagccgcagatggtggtgaaacctatgtcgtcgcgtacgatt
acttcatcagagatgagagatctggtcgggttattcagaaaacatggtatccaaggtgaa
ccctaa
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