Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT68807
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Entry
AGABI1DRAFT68807 CDS
T03136
Symbol
AGABI1DRAFT_68807
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI1DRAFT68807 (AGABI1DRAFT_68807)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT68807 (AGABI1DRAFT_68807)
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT68807 (AGABI1DRAFT_68807)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AGABI1DRAFT68807 (AGABI1DRAFT_68807)
Spliceosome [BR:
abp03041
]
Complex B
Other components
Prp19-related factors
AGABI1DRAFT68807 (AGABI1DRAFT_68807)
Complex C
AGABI1DRAFT68807 (AGABI1DRAFT_68807)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_15
Mad3_BUB1_I
PSII_Pbs27
ARM_TT21_C
DUF3130
Motif
Other DBs
NCBI-GeneID:
18830768
NCBI-ProteinID:
XP_007326265
JGI:
Agabi_varbur_1_68807
UniProt:
K5X4P2
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MPGEPSSYNSLASLFPLAYPVPSPLTHPDLLTHKDLHREEDLLRNPNSFRAWWTSLQATR
EACLAEQKLEGSLDVSDATRALLGPLASPLARLNFQRLTYLYESALVHFAGSFKLWKSYL
TMRMSFVCGKPVIRKRAGGKKKLPEMGDALEDELEDLEKWEGPLDPIVGWEEWKLLAATF
ERALMYLPKLPRLWLMYISIFFHPACPPNLSLTHARRTFDRALRTLPPSLHARIWTRYLL
LSERKGGVTAFSVYRRYLSVDPSLSERYVALLLNPVNAEPRPLEAAKLLLQLARNASKGQ
YISPEGKSPYQLLESFIDVVEKFSEQVGLDVEETLKSNQSIAEADSLKEVSESASVNGSG
ANINDTTKTVDPDEDPLNPRKFNIEDIIKKDGLGVYKDQAGRLWVGLATYWIKRAEFDRA
KHTFEAGLSSVLTVRDFNQIFDSYGEFGQSLMDALMESLKEEEDDEEIAETEKELDQQMK
DFEDLADRRPFLLNDVMIRRNPNDVQEWEKRVALWGEDDEKVAETYTQAFETINPRKATP
NFHRLYIAFARFYEEGGVSGKAEPDLQSARKILEKATKVNFRAVDDLAEIWCEWAEMELR
HDNDDEAIRVMQRAAAVPKNTKINYHDHSLSVQARLFKSLKLWSFYVDLEEAIGTVESAK
AVYDKIIELRIANAQIIVNYAAFLEENKYFEESFKVYERGVELFTFPVSFEIWNIYLSKF
IKRYGGTKLERARDLFEQALEKCPAKSCKPIFLLYAKLEEEHGLAKRAMSIYERATQEVN
DTDKFEMYKIYIAKATENFGLPATRPIYERAIEILPDRQTAEMCLHFAALERKLGEIDRA
RAVYAHASQFCDPRIHSRFWSEWNSFEIETGSEDTFREMLRIKRSVQAQFNTEASYLAAQ
TVAATQGSQISKENGEEPQDAMAAAEKQAGKGPAFVAAKATGSFKPAESNDVAASDQPSN
VDEIHISDDEDI
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagagcccagctcgtacaacagcctcgcctctctctttcctctcgcatatccc
gttccttctcccctcacccacccagacctcctcacccacaaagatctccaccgagaggag
gacctcctgcgcaacccaaattcttttcgcgcgtggtggacatctctccaggcaacacgg
gaagcctgcctcgctgagcaaaaactagaaggaagtcttgatgtctctgacgctactcgc
gctctcttaggccctctagcatcgccgttagctcgcctcaatttccagcggttaacttac
ttgtacgaatctgcccttgtgcactttgcaggctctttcaaactatggaaatcctatttg
actatgcgcatgtcctttgtttgcggaaagccagtcattagaaagcgggccggaggaaag
aagaagcttcctgagatgggagacgcacttgaagatgaacttgaggatctggaaaagtgg
gaaggaccgttggatccaattgttggttgggaggaatggaaattattggctgcaacgttt
gaaagggcgcttatgtatcttccaaaattgccgcgactgtggctcatgtacatatcgatc
ttctttcaccccgcttgtccgccgaatctttccctgacacatgcgcgacgtacgttcgac
agagcactacggacacttcctccttccttacacgcgcgtatatggacgcgatacttgctg
ttgtccgaaaggaaaggtggtgtgactgctttctccgtttacaggcgatatcttagcgtc
gatccctcgctgtcagagcgatacgttgcattgctgctgaaccctgtgaatgccgagccc
cgcccactggaagcagccaagctcctcttacaacttgcgcgaaacgcctccaaaggtcaa
tacatcagtccggaaggcaagagcccctaccagctactggagtccttcatcgacgttgtt
gaaaaattctcggagcaagttggacttgatgtggaagaaacattaaaatccaatcagtca
attgccgaagcagattctttgaaggaagtttctgaatccgcgtccgtcaatggatccggg
gcaaatatcaatgatactacgaaaactgtggaccctgatgaagatcctctcaacccccga
aaattcaatatcgaagatataatcaaaaaggacggtttgggtgtctacaaagaccaggcc
gggcggctttgggtcggattagcaacctattggataaaacgtgctgaattcgatagagcc
aaacatacctttgaggccggcctcagtagcgtccttaccgtccgtgattttaaccagata
ttcgattcctatggcgaattcggacagtctttgatggacgccctcatggaaagccttaaa
gaggaagaagacgatgaggaaattgccgaaacagagaaggagcttgatcaacagatgaaa
gactttgaagacctggctgacagacgacctttcttgcttaacgatgtgatgattaggcgt
aatccaaatgatgtccaagaatgggaaaaacgtgtcgcattgtggggagaagatgacgaa
aaagttgccgaaacttatacacaagctttcgaaactatcaatcctcgtaaagccactccc
aactttcaccggttgtatatagcttttgcgaggttctacgaggaaggtggcgtgtcaggg
aaagccgagcccgaccttcaatctgctcgaaaaatcttggagaaagctaccaaagtcaac
ttcagggctgtcgatgatcttgccgaaatttggtgcgaatgggcagagatggaacttcga
cacgacaatgatgatgaggccatccgagtaatgcaacgagccgctgctgttcctaagaat
acgaaaatcaactaccacgaccactcactttctgttcaagcacgcctcttcaaatcattg
aagctttggtcattctatgtagatctcgaagaagctatagggacagtggagtcagccaag
gctgtatacgacaagatcatcgagctgcgcattgccaatgcccagataatcgtcaattat
gccgctttcctcgaagagaataaatacttcgaggaaagcttcaaagtttatgaacggggc
gttgagttgttcacattccctgtttcctttgaaatctggaatatctatttgtctaaattc
atcaagcgctacggtggaaccaaacttgaacgcgctcgtgatctcttcgagcaggcactg
gaaaaatgtcccgccaagtcatgcaaacccatattcctcctttatgccaaattagaagag
gagcacgggcttgccaagcgcgcgatgtccatctacgagcgtgcgacccaagaggtcaat
gatactgacaagttcgagatgtacaaaatttatattgcgaaggctactgaaaacttcggg
ctaccagccaccaggccgatatatgaacgtgccattgaaattcttccggatcgtcaaacg
gcagaaatgtgccttcactttgctgccctagaacgcaaactcggagaaattgacagagct
cgtgcagtttatgcgcatgcatcacaattttgcgatcctcgcatccattcacgcttctgg
agcgaatggaattcatttgaaattgaaacggggtcggaggatacgtttcgagaaatgctc
agaatcaaacgaagtgtacaagctcaattcaacactgaagctagttatctggctgctcaa
actgtagcggctactcagggcagtcaaatatcgaaagaaaatggtgaagagcctcaagat
gctatggctgctgcggaaaagcaggctgggaaaggacctgcctttgtcgctgcaaaggcg
actggatcattcaagcccgcggagagtaatgacgtcgctgcttccgaccagccgagtaat
gttgatgagattcatatttccgatgatgaagatatttaa
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integrated database retrieval system
