Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT69105
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Entry
AGABI1DRAFT69105 CDS
T03136
Symbol
AGABI1DRAFT_69105
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03420
Nucleotide excision repair
abp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AGABI1DRAFT69105 (AGABI1DRAFT_69105)
09124 Replication and repair
03420 Nucleotide excision repair
AGABI1DRAFT69105 (AGABI1DRAFT_69105)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
abp04121
]
AGABI1DRAFT69105 (AGABI1DRAFT_69105)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT69105 (AGABI1DRAFT_69105)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abp04147
]
AGABI1DRAFT69105 (AGABI1DRAFT_69105)
Ubiquitin system [BR:
abp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
AGABI1DRAFT69105 (AGABI1DRAFT_69105)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
AGABI1DRAFT69105 (AGABI1DRAFT_69105)
TCR (transcription coupled repair) factors
Cul4-CSA complex
AGABI1DRAFT69105 (AGABI1DRAFT_69105)
Exosome [BR:
abp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AGABI1DRAFT69105 (AGABI1DRAFT_69105)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
T3SchapCesA
PNMA
Motif
Other DBs
NCBI-GeneID:
18830781
NCBI-ProteinID:
XP_007326278
JGI:
Agabi_varbur_1_69105
UniProt:
K5W810
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MDAKDFQSLEAMYELFGRVDGLKVLCAAFRKFIRTSVETIVTDAARDEELVNRLLELKHI
ANETVSTSFSETTSSSLSSSKRTKLPDKNFVYGLGDSFTLGFKARRNKPAEMIAKHLDKA
MRKGQGKSSDAEFDAMLDDVLGLYRFSEDKDVFRTFYHRSLAKRLLLSKSASDDFEASML
KNLKEKYDPEFGMGEDMFKDLALSRESMRDYHSKLDVDSPGRKLNVMVLQRSAWPFSKNE
KKFDLPPDMKEELNRFTLYYKTKHSGRALFWDHSLGTATLKARFLPGNKELSVSLYQAAV
LLLFNQSPQISFQDIKSQTEMDDAELRRTLQSLACGKKKVLKKIPPGKDVNDDDVFKFNE
SFDDLRAKVHINSIQAKVSPEESKRTNEAIEGDRKLYLDAAIVRIMKASKTMTYEKLKTA
TIDAVKNHFVPQVDIIKQRVDSLVEGDYLERDKTERNVFHYVA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgaaagatttccaatccttggaagcaatgtatgagctctttggccgggttgat
ggtctcaaggttctctgtgctgctttccgtaaattcatccggaccagtgttgaaaccata
gtcacagatgcagcgcgtgatgaagagctcgttaatcgcctacttgaactcaagcacatc
gccaacgaaactgtttccacatccttttctgaaaccacgtcatcctccctttcgtcgtca
aaacgtaccaaactaccagacaagaatttcgtttatggattaggggattctttcacgctt
gggttcaaagcgcgtcgtaacaaaccagctgagatgattgcgaagcatctggataaggct
atgcggaaaggtcaaggaaagagcagtgatgctgaatttgatgcaatgttggacgacgtg
ttgggtttgtatcgcttctcagaagataaggatgtcttcaggacattctatcatcggagt
ctggccaagagactactgttgtcaaagagtgcctccgatgactttgaggcgagcatgctc
aagaatctcaaagaaaaatacgatcccgagtttggcatgggagaggacatgttcaaggat
ctcgcactttcaagagagagtatgcgagattatcactccaaattggatgtagatagtccc
gggcggaagttgaacgttatggttctacaacgaagtgcctggccttttagcaagaacgag
aaaaagtttgacctacctcctgacatgaaagaagaacttaacaggtttacgttgtattac
aagacgaagcactcgggtcgtgcacttttctgggatcatagcttaggaactgcgactctc
aaagctaggtttttgcctggtaacaaagagttgtccgtcagtttgtatcaagccgcggtg
ttattacttttcaatcaatcgccgcaaatttcattccaggacatcaaaagtcaaaccgag
atggatgatgcagaattgcgaagaactttgcagagtttagcttgtggaaagaagaaagtg
ttgaaaaagattccgccgggaaaagatgtgaacgatgatgatgtgtttaaattcaatgaa
tcctttgacgatcttcgagcaaaagttcatatcaactctatccaagccaaagtttctcct
gaagagtcgaagagaaccaacgaagctattgaaggcgacaggaaactttacctcgatgct
gcgattgtacggattatgaaggctagcaagactatgacatatgagaaactgaagactgcg
actattgatgctgtgaagaatcatttcgtgccgcaagtggatatcatcaaacagagggtt
gattcgcttgtggaaggggattatttggagagggataagactgaaaggaatgtatttcat
tatgttgcttga
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