Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT70926
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Entry
AGABI1DRAFT70926 CDS
T03136
Symbol
AGABI1DRAFT_70926
Name
(RefSeq) hypothetical protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AGABI1DRAFT70926 (AGABI1DRAFT_70926)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT70926 (AGABI1DRAFT_70926)
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT70926 (AGABI1DRAFT_70926)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AGABI1DRAFT70926 (AGABI1DRAFT_70926)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AGABI1DRAFT70926 (AGABI1DRAFT_70926)
U7-dependent histone pre-mRNA processing factors
AGABI1DRAFT70926 (AGABI1DRAFT_70926)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
18830918
NCBI-ProteinID:
XP_007328110
JGI:
Agabi_varbur_1_70926
UniProt:
K5XBR6
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MADSAILSVTMLGAGQEVGRSCCVLQYRGKTLVCDTGVHPAHNGMASLPFIDDLDWSSVD
AILITHFHLDHAAALTYITEKTNFKDGKGKVYMTHPTKALHKFMMQDFVRTRRANFVKCP
HSSASSDALFSPLDMQMSLASIIAVSAHQLITVCPGVSFIPYHAGHVLGACMFLIDIAGL
KILYTGDYSREEDRHLIKAELPPIRPDVLVVESTYGVHTGESREEKEHRFTSLVHSIIRR
GGHVLLPTFALGRAQELLLILDDYWKKHPDLHNVPVYYASGLARKCMAVYQTYIHTMNAN
IRSRFARRDNPFVFKHISNVPQTRGWEKKIADGPPCVVLASPGFMQVGPSRELFEHWCPD
ARNGLIITGYSIEGTPARDIMTEPEEFTTLKGATIPRRISVDEISFSAHVDYAQNSEFIE
QVRAQHVVLVHGEATGMGRLRAAMQSRFKEKDEDVKIHTPRNLETLNLSFRGERVAKAIG
TLADSPPQTGDIVSGLLVAKDYSYTLLDPRDLRDFAGLTTCAVTQRQRIVLGVGWDLVRW
HLEGMFGNVEEGMDKDGVPTMRVMGVVDVKLTGEHELTLEWESSSSSDMIADSTLALIAG
IDKSPASVKRACFIFSLWRYQFVLIYTMVQPRQKTKNFKCCSDISIYRVIISINLVTSQP
HTHEHLPLQKHKHPHADAEGELSSMTRVQRLAMFLEAHFGEVEFHQPDEEGNRSMDSEEG
ERSDDEEASLLVRLDEADARIGLISLTVMSSNEALKRRVEAVLDMAVTTVSTLSEAFSSG
VAVTGDDAGLTRESIVEDKGEEEKAKEPIEMPTEEVPKGMEEDSNVTTEVVAVSEGQSSE
Q
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcggctattctgagcgtgacgatgctcggcgcgggtcaagaggtcgggagg
tcatgttgcgtattgcagtatcgtggaaagaccctcgtttgcgatacgggtgtgcacccg
gctcataatggcatggcttcactgccgtttatcgatgatttggactggagtagtgtggat
gccattcttattactcactttcacttggatcatgctgccgcattgacatatatcactgag
aaaacgaatttcaaggatgggaaagggaaggtgtacatgacccatccaacaaaggcctta
cacaaatttatgatgcaggattttgtacggacaaggcgagcgaatttcgtaaaatgcccc
catagttcagcgtcttcagatgcacttttctcgccactagacatgcaaatgtcattagct
tccatcattgctgtctccgcccaccaactcatcaccgtctgtcccggtgtttccttcatc
ccttaccacgctgggcacgtcctcggagcatgcatgttcctcatcgatatcgccggacta
aaaatcctctacacaggggactattctcgggaagaggaccgccacctcataaaagccgaa
cttccacctatccgcccagatgtcctcgtagttgaaagcacttacggtgtgcataccggt
gaaagtagagaagagaaggaacatcggtttacgtcgttggtgcattcgatcattcgaaga
ggaggacatgttttgttgccgacatttgctctcgggagagcacaggagttgttgttgatc
ctagatgactattggaagaagcacccggacttgcataatgtaccggtatattatgcgtcg
ggtttggcaagaaagtgtatggcggtttatcaaacttacatccacacaatgaacgccaat
attcggtcgagattcgctcgaagagataatcctttcgttttcaagcacatttcgaatgta
ccgcaaacgaggggttgggagaaaaaaattgcggatggacctccgtgtgttgtgcttgca
agtcctggtttcatgcaggtcggaccgagtcgagaacttttcgagcattggtgcccagac
gcccgtaacggtctcattatcactggttattcgattgaaggaacgccggctagggatatc
atgacggaaccagaagagttcaccacactcaaaggagcaacaataccgagacggatatcg
gtagacgaaatatcattcagcgcgcatgtggattacgctcaaaactcagaatttatcgaa
caagtcagagctcaacatgtggtactagtacacggtgaagcgactggtatgggtcgatta
agggcagcgatgcagtctaggttcaaggagaaagacgaggacgtcaagatccatacacct
cggaatttggagacgctgaatttgtcatttaggggtgaacgtgttgccaaggctataggt
accttggcggacagtccacctcaaacaggcgatatcgtctctggactattagtagccaag
gattattcgtatacacttcttgatcctcgggatttgcgagattttgcgggattgacgact
tgtgcggtaacgcagaggcagaggatagttttaggtgtgggttgggatttggttagatgg
catctggaaggtatgtttggaaatgtggaagaggggatggataaagatggtgttcctacc
atgagggttatgggagttgttgatgtgaaattgaccggtgaacatgagttgactttggag
tgggaatcgagttctagtagtgacatgatcgcggattcaacgttggctctgattgctgga
attgataagtcaccggcatctgtgaaacgtgcgtgttttattttttctctttggaggtat
caatttgtgttgatttatacaatggttcaaccacgtcaaaaaacaaaaaacttcaaatgc
tgctcggacatctctatctaccgcgttataatctcaatcaatctagtaacctcacaaccg
cacactcatgagcatcttcctctccaaaaacataaacacccacatgctgatgctgaagga
gaattatcatcaatgacaagggtacaacgtttagccatgtttttagaagcgcattttggg
gaggtggaatttcatcaaccggatgaagaggggaatcggagtatggattcggaagagggg
gagaggagtgatgatgaagaagcgtctttgttggttagacttgatgaagctgatgcgaga
attggtttgatatctttgacggtcatgagttcgaatgaggcgctcaagagacgtgtggaa
gcggttttggatatggcagtgactacggttagtacgttgagtgaggcttttagttctgga
gttgctgtgactggtgatgatgcgggattgacgcgagagagtattgtggaggacaagggg
gaggaggagaaggcgaaggagccaatagagatgccgacagaagaggtgccgaagggaatg
gaagaggactccaatgtaaccacggaagtcgtcgctgtatccgagggccaaagttcagaa
caatga
DBGET
integrated database retrieval system
