Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT71744
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Entry
AGABI1DRAFT71744 CDS
T03136
Symbol
AGABI1DRAFT_71744
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03022
Basal transcription factors
abp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AGABI1DRAFT71744 (AGABI1DRAFT_71744)
09124 Replication and repair
03420 Nucleotide excision repair
AGABI1DRAFT71744 (AGABI1DRAFT_71744)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT71744 (AGABI1DRAFT_71744)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT71744 (AGABI1DRAFT_71744)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AGABI1DRAFT71744 (AGABI1DRAFT_71744)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AGABI1DRAFT71744 (AGABI1DRAFT_71744)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR_1
zf-HIT
Motif
Other DBs
NCBI-GeneID:
18830981
NCBI-ProteinID:
XP_007328173
JGI:
Agabi_varbur_1_71744
UniProt:
K5W2J8
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MPPRRELVISAADSDSDISFPDDDYDASRDKGKSKGKGRAEKKKVDKGKGKAKDSQAYTW
EASYTRSWETVQEDEAGSLQTSVQELMARGRRKRLLAPAAAIRRTIIRHVILLLDLSSAM
LDRDMRPTRFDLMLQYAREFILEWFDQNPLGQIGVVGMRAGLGERIGDLSGESGNPQEVL
SYIKERHKLEPTGEPSLQNAIEMAKASMSHLPTHSSREIIIIFGSLTTCDPGNIHETLET
CVKNKVRISVVALAAEMKICRELSDKTGGQFGVAMNEGHFKDLLFELVPPPAQRALTRTM
GAPSASLSADLMMMGFPTRLPEASAPTLCVCHAELKSQGFLCPRCLAKVCDVPTDCHVCG
LMIVSSPHLARSYHHLFPVKPYDAVPNLEDIPQPSDACHGCAKLFPMTTSIPIGEGVSVV
GRYRCPDCRHDFCSDCDVFVHEVIHCCPGCGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaggcgagagttggttatcagcgcggccgactcggactcggacatctctttt
ccagatgacgactatgacgccagccgggataagggcaaaagcaagggtaaaggtagggcg
gaaaagaaaaaagttgacaaaggaaagggaaaagccaaagactctcaagcatatacttgg
gaagcttcatatacgcgttcatgggagactgtgcaagaggacgaagctgggagtctccag
acgtccgtccaggaactcatggcaaggggccgtcggaaaagactccttgctccagctgcg
gccattcgtcgaactataattcgtcatgttattctgttactggatctttcctctgctatg
ctggaccgtgatatgcgtccgacacgatttgacttgatgcttcaatatgctcgtgaattt
atcttagaatggttcgaccagaatccgctagggcaaattggtgttgttggaatgcgagca
ggccttggagagcgtatcggggatctttcaggcgaatcaggtaatcctcaagaggtcttg
tcctacatcaaggaacgacataagctcgagcctactggagaacccagtttacagaatgcc
atcgaaatggcaaaagcaagcatgagtcatcttccaacccattcctcgcgcgaaataata
atcatattcggttccttaaccacatgcgatcccggcaatattcacgaaacgctcgaaaca
tgtgtcaagaacaaagttcgcatctctgtagtcgcactcgctgcagagatgaagatatgt
cgtgaactatctgataaaacaggcggccaattcggtgtggctatgaatgaaggacatttt
aaggacctcctttttgaactggttccaccacccgctcagagggcgctaacgcgcaccatg
ggcgcaccatccgctagcctctctgcggatctcatgatgatgggctttccgacccgatta
ccggaagcatccgcgccgacgttgtgtgtctgtcatgcggagttaaagagtcaaggtttt
ctatgcccccgctgccttgctaaagtgtgcgatgtgccaacggattgccatgtctgtgga
ctcatgattgtaagctcacctcatttggcaagaagctaccatcacctcttccccgtgaaa
ccctatgatgccgtaccaaacttggaagatatacctcagccctcggatgcgtgtcatggt
tgcgcaaaactctttccgatgacaacgtcaataccgattggggaaggtgtgagtgtagtg
ggtagatacagatgcccggactgccgacacgatttttgctcggactgtgatgtctttgta
catgaagtgatacactgttgtccaggatgtgggaagtag
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integrated database retrieval system
