Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT78534
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Entry
AGABI1DRAFT78534 CDS
T03136
Symbol
AGABI1DRAFT_78534
Name
(RefSeq) hypothetical protein
KO
K14299
nucleoporin SEH1
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGABI1DRAFT78534 (AGABI1DRAFT_78534)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT78534 (AGABI1DRAFT_78534)
04131 Membrane trafficking [BR:
abp04131
]
AGABI1DRAFT78534 (AGABI1DRAFT_78534)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AGABI1DRAFT78534 (AGABI1DRAFT_78534)
Membrane trafficking [BR:
abp04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
AGABI1DRAFT78534 (AGABI1DRAFT_78534)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_2nd
Ge1_WD40
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
18831512
NCBI-ProteinID:
XP_007332898
JGI:
Agabi_varbur_1_78534
UniProt:
K5X009
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MQQTGLIQHAHDDLITDTAYDFYGLRLATCGLDQRIKIWQLDESNGSWRVQDEWKAHEAP
VSKIHWAHPEFGSVIASCSFDRTAKVWEQASANALLDTQQFPNATADGGVSSQPVSRWLE
RNVMAESKGTVRDVEFAPHYFGLKLATISTDNVLRVYECVDQSSLTTWQLLLDIDVLNLP
TTSSTPTFHSSRQHTIALSTPTQTTATLDLKTSNNFADHAQALSQGLAQNAALNNQAAAS
RHTINNREADGGWCLSWCKDRYWGEILAVGAATSGVIKIVQLTPSRRHITLLTLDPSPSL
ASSASIPPTPSITQATNTSNINNISANLPAPGHTTSPLQPFATPTAATASSSLIPAPPSQ
GPSAERNKEATKSAITSLSWAPSCGRSYHLIATGSRDGTVHIWRVQPGEELDSVGPLTDD
GPDLGKDTSETDESRWSVIGVSKVEHKSSVSRVEWNITGTILSSAGNDGRIRLWKAGPEG
QWKSAGTIGVEQVEESEADSQRDVDMER
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagacaggactcatccaacacgcgcacgacgacctcatcaccgacaccgcctac
gatttctatggtctgcgccttgcaacatgcggtcttgaccagagaataaagatatggcag
ttggacgaaagcaatggttcatggcgcgtccaggacgagtggaaagcgcatgaggcacct
gtgtcaaaaatacactgggcacaccccgaatttggttctgtaattgcttcttgttcgttt
gaccgtactgccaaagtttgggaacaagcttctgcaaatgctcttcttgatacgcaacag
tttccgaatgcgactgccgatggtggcgtttcatctcaacctgtatcgcgttggttggaa
aggaatgttatggcggagtccaaagggacagtacgtgacgttgaatttgcacctcactat
ttcggtctcaaactggccacaatatctactgacaacgtcctacgcgtctatgaatgtgtc
gaccaatcctctctcacaacctggcaactcctcttggacatcgatgtcctcaatctcccc
acaacatcatccacgccaacatttcattcttcccgtcagcataccatagctttatccact
ccaactcaaaccacagcaactctggatctcaaaacgtctaataattttgctgatcatgct
caagctctttcacagggcctagcgcaaaacgctgccttgaataatcaagccgcggcttcg
agacatactattaacaatcgtgaagctgatggaggttggtgcttgagttggtgtaaagat
cggtattggggtgagattttggctgttggtgcagctacttcgggtgttatcaagatcgtt
caacttacaccttcgcgtcgacatatcactcttcttacccttgatccttcaccttcccta
gcttcctcagccagtataccgcctactcctagcataacccaggccacaaatacgtccaac
atcaacaacatttcagcgaatctcccagcaccaggtcatacaactagtcctcttcaacct
tttgctacgcctacagccgccacagcttcatcctctctcattcctgctccaccctcacaa
ggaccatccgctgagcggaataaagaagctactaaatcagccatcacatcactttcatgg
gctccttcatgtggaaggtcctatcacctaatagcgactgggagtcgagatggcaccgtt
catatttggcgggtacaacctggagaggaattggactctgttggtcctttgactgatgat
ggccctgatcttgggaaagatacctcggaaactgatgaaagtagatggagtgtaatcggt
gtttcgaaagttgaacataaatcttcggtaagcagagtagaatggaacattactggcaca
attttatcttctgccggcaacgacggtcgtataaggttgtggaaagcaggtcccgaaggg
caatggaaatcagctggaactatcggagttgaacaagtcgaggaatcagaagccgactca
caacgtgatgttgacatggagcgttaa
DBGET
integrated database retrieval system
