Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT79866
Help
Entry
AGABI1DRAFT79866 CDS
T03136
Symbol
AGABI1DRAFT_79866
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI1DRAFT79866 (AGABI1DRAFT_79866)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT79866 (AGABI1DRAFT_79866)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
AGABI1DRAFT79866 (AGABI1DRAFT_79866)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
DUP
Motif
Other DBs
NCBI-GeneID:
18831618
NCBI-ProteinID:
XP_007333873
JGI:
Agabi_varbur_1_79866
UniProt:
K5WXI4
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MSESTKLQTAALAATRTAAGLPADIGFYRSIDSGLAHDVDAVSSRVLNLTNRLLQYSSSV
NPQAAKGNRKGKTKLEDQDDVADNFHSLVVDVMDQLFERTDSCLDQILGRNKAPAISINP
PAPQKRVRIFAIHVPANLILLQKVGSHKGALDPAIHHASQLPKPQLSFKYKADNDDAPWY
PSLTHKYNALVPLGHVYADADDDTTVIANHPYRYEINHITYPSHVYAPANPSPPASLAET
PYSWISTPDGLQNMLTKLRAASEIAVDLEHHSYRTYLGFLCLMQISTREEDFVVDVIALR
DEMEVLNEVFTDPKIVKVFHGAESDIVWLQQDFNLYVVNLFDTYHASKLLEFPRHGLANL
LEMYCDYIPDKRYQLADWRIRPLPKEMLEYARSDTHFLLFIYDNLRNALLDRGGPASRSR
SSSPPNASTSLSTPPANILRTPPPTAHASKNPLHASINHVLTRSSETCLRVYVKEVYDRS
SGTGSNGWDTLARKWNKPLFTALSFSYQSSSDEGHNVPEMQKAVYRAVHWWRESVSREED
ESTRYVLPNQYLFRIAEAPPGDLGNLLRLFGSSVPVVVKRRAKELLDVVRNAVKRSLGGG
DGGGGEAKVKVKEEGEKEEDEKGDEISESKEVKESFAETNEKLWGPLSQISFFLITMLKA
PSSLFSKKIKNATIPATTASDYAATRSALFGSIANTGVVPGKEDVSQNSHFQELVTKINS
TLVIMPSVPKVRQITLTVSSTVQVTSKEEDGNVVGMQVEIPYVPAAQRQKATVIEEKERD
TIVVVGKSKTKKRKRTKSTQAAGSSSQAVDNNRSTSDGKEGEEGFDFSSVPNVLDENPEV
EAKKPVKKRQRKAKGGPKSSDFPAPPRAYSEFKGGNQAHTFK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagagcacgaaactgcagacagcagcgctggcggcgacgcgcaccgctgctggg
ctccccgcagacataggtttctaccgctcgatcgactcagggctcgcgcacgacgtcgac
gccgtctcttctcgcgtcttgaacctcaccaacagacttctccaatactcgtcttctgtg
aacccacaggctgccaagggaaatagaaaaggaaagacgaaattggaggaccaggatgat
gttgccgataatttccattcactggttgtggatgtcatggatcagttgttcgaacgcaca
gactcttgcctggatcaaattctaggtcggaataaggctcctgcaatttccataaaccct
cctgcaccacaaaaacgagtaagaatattcgctattcatgtacctgcgaatctcatactc
ctgcagaaagtcggctcgcacaagggcgccctcgacccggctatacaccacgcctcgcag
ctcccaaagcctcagctctcgtttaaatacaaagcggacaacgacgatgcaccttggtat
ccttctctcacccacaaatacaatgcactggtgcctctaggtcatgtgtacgcagacgcg
gacgatgatacgactgtgatagctaatcatccataccgctacgagattaaccatattacc
tatccctcccacgtgtacgcccctgcgaacccgtcccctcctgcttcacttgcagagaca
ccatattcttggatctcaactcccgatggccttcaaaacatgctcaccaaacttcgcgcc
gcttccgaaattgccgtggacttggaacatcacagctatcgtacataccttggtttcctg
tgtttgatgcaaattagtactcgagaagaagactttgtcgtcgatgtcattgctttgagg
gatgagatggaggtattaaatgaggtgtttacagatcctaagatcgtgaaagttttccat
ggcgcagagagcgatatcgtatggttgcagcaggactttaacctttacgtcgtgaatctg
tttgatacatatcatgcgtccaagttgcttgaatttcctcgacatggactcgcaaattta
ttggaaatgtattgtgattacatacctgacaagcgttatcagcttgcagattggcgtatt
cggccacttcctaaggaaatgctcgaatatgctcgttcggatacacattttctactcttc
atctatgataaccttcgtaatgccctcctggaccgtggcgggccagcctctcgatcacgt
tcatcgtctcctccaaacgcgagcacctctttatccacaccccccgctaatatccttcgt
acaccaccaccaacagcacatgcttccaaaaatcctcttcacgcatcaatcaaccatgtt
ctgactcgttcttctgaaacatgtcttcgtgtatatgttaaagaagtctatgaccgttca
tccggaactggatcaaatgggtgggacactttggcgagaaagtggaacaaaccattgttt
accgcgctttcattttcttatcagtcgtcatctgatgaagggcataatgttccagaaatg
cagaaagctgtgtatcgagctgtgcattggtggcgcgaaagtgtttcgagagaagaagat
gagagtacgaggtatgtattaccaaatcaatatttgtttagaattgcggaggcgccacct
ggcgatcttgggaacttgttgaggttgtttgggagttctgtgccggttgtggttaagagg
agagcgaaagagttgttggatgttgttaggaatgctgtgaagcgtagtttgggaggagga
gatggtggcggtggcgaagcgaaggtgaaggtgaaggaggaaggagaaaaggaggaggat
gagaaaggagacgaaataagcgagtcgaaggaggtgaaggagagttttgctgaaacgaat
gaaaaactatggggtccgttatctcaaatttctttctttctcatcactatgctcaaagca
ccgtcatctctattcagcaaaaaaattaaaaatgcaacaatccctgcaacgaccgcgtca
gactacgcggctacacgtagtgcattatttgggagcatcgcaaatacgggtgtggtaccg
gggaaagaagatgtatcacaaaattcgcattttcaggagttggtaactaaaatcaatagc
acgttggttataatgccgtccgtacccaaggttcgtcaaatcaccctcactgtatctagc
acagttcaagtaacgagcaaagaggaagacggaaacgtggttggcatgcaggtcgaaata
ccttatgttccggctgcccaacgtcaaaaggcgactgttattgaagagaaagaaagggat
acgattgtggttgttggaaagtcgaagacgaagaagcgaaaacgaacgaagagtactcag
gctgcgggctcgagtagtcaggctgtggacaacaacaggtcaacatcggatgggaaggag
ggtgaagagggtttcgatttttccagtgtaccgaatgttcttgatgaaaatcccgaggtg
gaggcgaagaaacctgtgaaaaagagacagagaaaggcgaaaggtgggccgaagtcgagc
gattttcctgcgccgccacgggcatatagtgaattcaaaggcggtaatcaggcacacaca
ttcaagtag
DBGET
integrated database retrieval system
