Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT91927
Help
Entry
AGABI1DRAFT91927 CDS
T03136
Symbol
AGABI1DRAFT_91927
Name
(RefSeq) hypothetical protein
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT91927 (AGABI1DRAFT_91927)
Enzymes [BR:
abp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AGABI1DRAFT91927 (AGABI1DRAFT_91927)
5.6.2.5 RNA 5'-3' helicase
AGABI1DRAFT91927 (AGABI1DRAFT_91927)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AGABI1DRAFT91927 (AGABI1DRAFT_91927)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
SEN1_barrel
AAA_19
AAA_30
Viral_helicase1
UvrD-helicase
MscS_porin
nSTAND3
Motif
Other DBs
NCBI-GeneID:
18832432
NCBI-ProteinID:
XP_007330049
JGI:
Agabi_varbur_1_91927
UniProt:
K5X823
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MENKDIPKLLEHLRDDPVDNTGVTDQILGRIYNYLLAVSKDADGKLHWFCQRASSTTIGA
ASFLLRLFAYDGSEAETWREVKRTSRMTYFAKFSSAIMDNFWTTFDSWDVEQMLKSLERF
GITSANSYPMTQTLSDIPAPIVLRIMSNWAIFSDPHIQNIISSIPPRAIFQDWPTAIVPP
GVFVLLVEGTSVVRQWAISQLSHYPSGPITADNFTESHMKALEALVYGVTSRDSPGSSSG
PFSSLHFAQNIPEIWAGLNSALRFVPVEYLKRNNRCKVDIRKLVTLHLSDTDIHFVEILY
SFNFLLKRLEASFWENEPSEYPITVFDVIKNNSAFSNLLQKPDSSGSANGKSRYLSWIFE
YFHSVQKIEVIYDTVVAKISDFLLEELQHERFGDARSHILESAARASGQSDTKAKEALLS
VMDIHANTLTRIAFHRDYDKPQWSRARHALRDLLDGILLSDVQQTSFTITEACRLLGLIV
LKKPPNQISALSIRTGLWPKVYQSIHRQDPDGLARVLILVSEISHINVLNESTFGSLSSA
TNIGKAYANGGAVVTAINSALSAHRAGFLGAVRNFADLSTSSQLSDVLRRPKVGKAVLLL
LLSPVDDLRTTATTLVGQAFDVDGRLECIRALLDNLPDPSIDGLVEFLNRFCAYAPTVPE
ACSLSKSLVQCFTDVIEALCSGAGGLLRRPQFLRCDDIHGPASRMIELWVLMSKAIAVIF
KRTPAWSIYFDNEEMVEWMRDALIFGRDMLAQWQVIESAANAFNRRQQGRSTGTASVAVD
RLSETGQKMISSFQDVLTELTRWLRLTDEELLHQSFSLLQSLLDLFRKTGIRPCEAAFSK
LTKYVDSARKDINHTRSRLDTSRITALEEALAVYTDEDEIKIISEQTFKKSHKPVKEKFS
IHEPTKRPDSSLSLRKETKAEKQSIFKQKQTKSTIANSLSEKDGAKGNRNVAALSMPGKS
DLTLSSAAEKQVFNRRPTEKVRYKNEAGTALASESSSESDGSESDAPAGGLASLAKKFAK
SPKIRKPVERKQIKILPTASMAEDIRMVRFKQREEAQRAKKRMRPDISGLHRTLLSWNYD
HDGPMPPGFETKLDPIPDIFMDLNHYRRVFEPLLMLECWAQIVQAKYEPQETLECKITSK
QYADEWLELDIVYESNVRKDYYLSQETDVVLLRNPHTNDGVMAKTKSFTSNYQGVQASLR
CYLKDGARDPGLQISTSWRISKVFSLSTLHREYAALQSLPYYDFVNTILRPRLQNVELSN
KQEIRKTMSDFNINEPQAIAVLKSMATNGFSLIQGPPGTGKTSTICGLVSLALSKRNRPA
VPIQIGKGPTERPPLPKVLLCAPSNAAIDEIARRIKDGYRGPEKRGEAIKVVRIGTEQSM
NSSVKDVSLDHLVDLEIDPPNSGDSSGEIITIRKELEGIRVKKDQLHRKLEEDPNTAQLA
TIQSEIAQLNARRSSLAGRMDRLKDEQKSASRTLDALRRSTRQKILLEADVICSTLSGAG
HEIIERLDFDMIIVDESAQAIELSTLIPLKYSCQRCILVGDPQQLPPTVLSQEASKYRYN
QSLFVRMQRSQPDAVHLLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQPWHKNAH
FGIYKFFNVSKGLEEMSRHSIKNLAECHVAVALFNRLRREYGQDMSDIDYRVGIVSMYRA
QIAELKRQFEQRFGKEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGFLSDVRRM
NVALTRAKSSLYILGNAATLERSDPNWRKIVGDARGRSRLVEADHTYFIKPISTLNDRHG
PKSPKSIPEEIPQSLPDLFKPKELKDAQPSKPASTTKLPTNSASTNSDVNNEPQKSQVIG
VKRPAEESLSTKQENVKRPAPPPIKRPKKAPNIFIPKNKKT
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaagacattccgaaactcctcgaacacctgcgcgacgatcccgttgacaat
actggcgtgacagaccaaattctagggcgaatctacaactatttgctggccgtatccaaa
gacgcagatggcaagttgcactggttttgtcaacgtgcaagctcaacgacaattggagcc
gcatcgtttcttctgaggctattcgcctacgacgggtcagaggctgaaacatggcgagag
gtcaaaaggacttcgagaatgacatattttgccaaattttcttctgcaataatggacaac
ttttggacaacttttgactcttgggatgttgaacagatgttgaagtcactcgaacggttt
ggcattacttctgcaaattcatatccaatgactcagactctctcggatattcctgccccc
attgtacttcgtataatgtccaattgggccatcttttcagatccccacatccaaaacatc
attagctctatacctccccgcgccatcttccaagattggcccactgcaatagtaccccct
ggggtgtttgttttacttgttgagggaacctcggttgtgcgacagtgggcaatttcccaa
ttatcgcattatccatcgggccccatcactgccgataatttcacagagagccatatgaag
gccctcgaggctcttgtttatggtgtcacatcccgggattccccaggatcttcgtctgga
cccttctcatcccttcatttcgcccagaatattcctgagatctgggcgggtttgaactcg
gccttgcgttttgtccctgtagaatatttaaaacgaaacaaccgctgcaaggttgacatc
cgcaagttagtgacgcttcatctgagtgatactgatatccactttgttgagatattgtat
agcttcaactttctgcttaaacgcctcgaggcatctttttgggaaaatgaaccgtccgag
taccctataaccgttttcgatgtcatcaagaacaactctgcttttagcaaccttttgcaa
aaaccagatagtagtggttcagcaaatgggaaatctcgttacttgtcttggatattcgaa
tatttccactctgtccaaaagattgaagttatctacgacactgttgtagcaaaaatatcc
gattttcttctcgaggagctgcagcatgaaaggttcggagacgcacgctcgcatatactt
gaatcggcggcgcgtgcgagtgggcaatctgatacgaaagctaaggaagctctactgtct
gtgatggacatccatgccaacactttgactcgtatagcgtttcatcgtgattacgataaa
ccccaatggtcgcgagcccgtcatgctctcagggatcttctagatggaatcctgctttca
gacgttcagcagacgtcgtttaccatcacagaggcatgccggctcctcggtcttatcgtg
ctgaagaagccacccaatcaaatctcggcattatctattcgcactgggttgtggcccaaa
gtttaccagtcaatccatcgtcaagatccagatggccttgcaagggttcttatactcgtg
tctgaaatctctcatatcaatgttttgaatgagagtacctttgggtcgctttcatcagcc
accaacattggaaaagcatatgcaaatggtggtgctgtggtgactgcgataaactccgca
ttgtccgcacatcgcgcaggtttcctgggtgctgtcaggaactttgcagatctcagcacg
tcctcacagctctccgacgtcctccggcgtcccaaggtcggcaaggctgtactccttctc
ctactctctcccgtcgatgaccttcgcaccactgccacgactcttgttggccaagccttc
gatgtcgacggtcgtttggaatgtattcgtgccctattggacaaccttccggatccgtct
atcgatggacttgtggagttcctcaataggttttgtgcttatgcaccaaccgtgcccgag
gcttgttctctgtcaaagtcactggttcagtgtttcactgatgtcattgaggctctttgc
tccggagctggtgggcttcttcgtcgacctcaatttttacgatgtgatgacattcacggc
cccgcttcgcgaatgattgaactatgggttttgatgtcaaaagctattgccgtcattttc
aagcgtacgcccgcgtggtcgatctactttgataacgaagagatggtagagtggatgcga
gatgccctcatctttggacgcgatatgttagctcagtggcaagttattgaaagtgcggca
aacgcgtttaatcggcggcagcaaggtcgaagcacagggacagcgagtgttgcagtggac
aggttatccgagacagggcagaagatgatcagtagcttccaggatgttcttaccgagttg
acgaggtggttacggctgaccgatgaagagcttctccatcagtcgttctccctccttcaa
tccctgctcgacctctttcgtaaaacaggaattcggccttgtgaagctgcattctcaaag
ttaacgaaatacgtcgattctgctcgcaaagacatcaatcacacgcgtagccggctcgat
acgtctcgtataacggctctcgaggaagctctcgccgtttataccgatgaagatgagatc
aagatcatctcggaacagacgttcaaaaagtctcataaaccggtgaaggagaaattttct
atccacgagccgacgaaacgaccggactcttctttatctttgcgaaaggagactaaggct
gaaaagcagtctattttcaagcaaaaacagaccaagtctacaatcgccaactctcttagt
gaaaaggacggggcgaaagggaataggaacgtggcagccctctccatgcctgggaagtcc
gacctcactctttcctccgctgctgagaaacaagtcttcaatcgacgaccaacggaaaag
gtgcgctacaagaacgaagccggaacagcattggcttcagaaagctcttctgaatctgat
ggatctgaatcggatgctcccgctggtggccttgcgagccttgcgaagaagttcgctaaa
tctcccaagatcaggaaaccggttgagcgcaagcaaatcaaaattcttccgacagcgtct
atggcggaggatatcagaatggttcgcttcaagcaacgtgaagaagctcaaagagcgaaa
aagcggatgaggcctgatatctctggccttcaccgcactttgctttcatggaactatgac
cacgatgggccgatgccccccgggttcgagacgaaactcgaccccatacccgatatcttc
atggacctcaaccactatcgccgcgtttttgaacctcttctcatgttagagtgctgggca
cagatcgtacaggcaaaatatgagccacaagaaacgttggaatgcaagattacatctaag
caatacgcagatgaatggctcgagcttgatatcgtttatgaaagtaatgtccgaaaggat
tattacctttcccaggagacagatgtagttctacttcggaacccacacactaacgatggt
gtcatggcaaaaacaaaaagcttcacgtctaactatcagggagttcaagcttctttacgc
tgctacttgaaagatggtgcaagggatcctggtcttcaaatatccacgtcgtggagaata
agtaaagtgttcagcttgagcactctccaccgggagtatgctgcactccaatcgttgccc
tactacgatttcgtcaacactatactccgaccccgactacaaaacgttgaactttccaat
aaacaagaaattcgaaagactatgtctgatttcaatatcaatgaacctcaggcaatagcg
gttttgaaaagtatggcaactaatggattttctctgatacaagggccaccaggaaccgga
aagacatcgacaatctgtggtctagtctcgttggccctttctaagagaaacagaccagct
gttcctatacagattggaaaggggcctactgagcggccgccgctgcccaaggtgctgctg
tgtgcaccgagtaatgccgcaattgatgaaatagcacgtcgtatcaaggatggttacaga
gggcccgaaaagcgtggagaggctatcaaagtggtccgcatcggtactgaacagtcaatg
aactcctcggtcaaggacgtttcacttgaccatttagttgacctggagattgatcctccg
aatagcggtgacagtagtggagaaatcataacaatacgaaaagaactcgaaggaatcagg
gttaagaaggatcagctgcacaggaaactcgaagaagatccgaacacagcccagctcgcc
accatccaatcagaaattgctcagttgaatgcgcgcagatcaagcctcgctggccgcatg
gatcgcctcaaagatgaacaaaaatcagcttcacgaaccctagacgctctacggcgatca
acacgacaaaaaattcttctcgaagctgatgtgatttgctcaacgttatcgggtgctggc
catgaaattatcgagcggctcgattttgacatgatcatcgtcgatgaatccgctcaggcc
attgaacttagcacccttattcccctcaaatatagttgccagcgttgtatcttagtcgga
gatccccagcagctaccacccacagtcctttcgcaagaggcatcaaaataccgatacaac
caatcactatttgtccgaatgcagagatcccaacctgacgccgtccacctcttaagtatt
cagtatcgcatgcaccccgaaatcagccaactaccaagctcagtcttttaccaaggcaga
ctcaatgatggtccaagcatggccgaaaaaacagcccagccgtggcataagaatgcccat
ttcggaatttacaaattcttcaatgtatccaaaggtcttgaggaaatgagcaggcactca
atcaagaatttagcggaatgccatgttgctgtagcgctctttaatcgacttcggcgtgag
tatggtcaagacatgagtgacattgattaccgcgtcggaatcgtgtccatgtatagagct
caaattgccgagctcaagcgccaatttgaacagcgattcgggaaggagatacttagtcgc
gttgatttcaacactgttgatgggtttcaaggacaggaaaaggatattatcattctgtcg
tgtgttcgagcaggcccgggtctacagacggtcggcttcttatcggacgttcgacgcatg
aatgttgctttaacgcgggcgaaatcctccctgtatattctcggaaacgcggccactctg
gaaaggagtgatcccaattggcgcaaaattgtcggtgacgcaagaggtcgctcgcgtttg
gttgaagcagatcatacctacttcatcaaaccaatttctacattgaacgacaggcacggc
cccaaatctccgaagtcaattcccgaagaaatacctcagtctttgccagatttattcaag
cctaaagaactcaaagacgcgcagcctagcaaaccagcttcgaccaccaaactacctaca
aatagtgcttccactaacagcgatgtgaataacgaacctcagaaatcgcaggtcataggg
gtcaaaagaccagccgaagaatcgttatcgaccaagcaagagaacgtcaagcgtccggca
ccaccacctataaagcgcccgaaaaaggcacctaatatctttatacccaagaataagaaa
acatga
DBGET
integrated database retrieval system
