Azospirillum brasilense Az39: ABAZ39_07690
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Entry
ABAZ39_07690 CDS
T03288
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
abq
Azospirillum brasilense Az39
Pathway
abq03410
Base excision repair
abq03430
Mismatch repair
abq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABAZ39_07690
03430 Mismatch repair
ABAZ39_07690
03440 Homologous recombination
ABAZ39_07690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abq03400
]
ABAZ39_07690
DNA repair and recombination proteins [BR:
abq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABAZ39_07690
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABAZ39_07690
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABAZ39_07690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AIB11882
UniProt:
A0A060DGD4
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Position
complement(1577739..1579538)
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AA seq
599 aa
AA seq
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MTDTVPAFLNVAHSLSGKRWQARPYDERLAWGLAQGRGLPEIVGRVLAARGVTEEACDGF
LNPTLKALLPDPSRFKDMDIAAERIARAVMDGEPVAVFGDYDVDGATSSALLRRFFRAVG
ADLRIYVPDRMKEGYGPNGPALLRLKAEGVRLVVTVDCGISAFAALEAAAEAGLEVVVLD
HHAAEPRLPPAVALVNPNRLDEDGAYRTLCAAGVTFLAVVAVNRALRSAGFYAGRNEPNL
MEWLDLVALGTVCDVVPLTGLNRALVAQGLKVMARRANPGLSALSDVAGVKEKPDAYHAG
FVLGPRVNAGGRVGASDLGARLLSTDDPMEAMELAQKLEAHNAERRAVEQGVLADAMARL
EEHAEELAELVFVAGEGWHPGVIGIVASRLKERYSRPACVIALEEGADGTVIGKASGRSV
RGVDLGAAVIAARQEGLLMAGGGHRMAAGFTVAGSKLADLQAFLTGRVAEQVAAAPLVPT
LELDGALSVGAANTSLVDRLNQLGPFGTGNAEPRFAVTDARVVRADVVGANHVRCILQGG
DGARLKAIAFRALESEMGKALLMGRGSPFHIAGVLRIDRWNGAEGVQLLIDDAAPSQTM
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgttcccgccttcctgaacgtcgcccattccctgtccggcaagcgctgg
caggcgcggccctacgacgagcggctggcctgggggctggcgcaggggcgggggctgccg
gagatcgtcgggcgggtgctcgccgcccgtggggtgaccgaggaggcgtgcgacggcttc
ctgaacccgacgctgaaggcgctgcttcccgacccctcccgcttcaaggacatggacatc
gccgcggagcgcatcgcccgcgccgtcatggacggcgagccggtggccgtctttggcgac
tatgacgtggacggcgccacctcctccgcgctgctgcggcgcttcttccgggcggtgggg
gcggatctgcgcatctacgtgcccgaccgcatgaaggagggctacggccccaacggcccg
gcgctgctgcggctgaaggccgagggcgtgcggctggtcgtgacggtggattgcggcatc
tccgccttcgcggccctggaggcggcggcggaggccgggctggaggtggtggtgctcgac
catcacgcggcggaaccgcgcctgccgccggccgtcgccctggtcaacccgaaccggctg
gacgaggacggcgcctaccgcacgctgtgcgcggcgggggtcaccttcctggccgtggtg
gcggtgaaccgggcgctgcgcagcgccggattctacgcgggccgcaacgagccgaacctc
atggaatggctcgacctcgtggcgctgggcacggtgtgcgacgtggtgccgctgacgggg
ttgaaccgcgccctggttgcgcaggggctgaaggtgatggcgcggcgcgccaaccccggc
ctgtccgccctgtccgatgtcgccggggtcaaggagaagccggacgcctaccacgccggc
ttcgtgctcggcccgcgggtcaacgccggcgggcgcgtcggcgcgtcggacctcggggcg
cggctgctctccaccgacgaccccatggaggcgatggaactggcccagaagctggaggcc
cacaacgccgagcgccgcgcggtggagcagggcgtgctcgccgacgccatggcccggctg
gaggagcacgccgaggaactggccgagttggtcttcgtggcgggggagggctggcacccc
ggcgtgatcggcatcgtcgccagccgcctgaaggagcgctacagccgccccgcctgcgtc
atcgcgctggaggagggggcggatggcacggtgatcggcaaggcctcgggccgctcggtg
cgcggggtcgatctcggggcggcggtgatcgcggcgcggcaggaagggctgctgatggcc
ggcggcgggcaccgcatggcggccggcttcaccgtggccgggagcaagctggccgacctg
caggccttcctgaccggccgcgtcgccgaacaggtggccgcggccccgctggtgccgacg
ctggaactggacggcgcgctgtccgtgggggcggcgaacacgtccctggttgaccgcctg
aaccagctcggcccgttcggcaccggcaacgcggagccgcgcttcgccgtcaccgacgcc
cgtgtggtgcgggccgacgtggtcggggcgaatcatgtccgctgcatcctgcagggtggc
gacggcgcccggctgaaggccatcgccttccgcgcgctggagagcgagatgggaaaagcc
ctgctgatgggccgcggatcgcccttccacatcgccggtgtcctgcgcatcgaccgctgg
aacggggcggagggagtccagctcctgatcgacgacgccgcaccctcccaaaccatgtga
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