Azospirillum brasilense Az39: ABAZ39_17305
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Entry
ABAZ39_17305 CDS
T03288
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
abq
Azospirillum brasilense Az39
Brite
KEGG Orthology (KO) [BR:
abq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abq03032
]
ABAZ39_17305
03400 DNA repair and recombination proteins [BR:
abq03400
]
ABAZ39_17305
Enzymes [BR:
abq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABAZ39_17305
DNA replication proteins [BR:
abq03032
]
Prokaryotic type
DNA Topoisomerases
ABAZ39_17305
DNA repair and recombination proteins [BR:
abq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABAZ39_17305
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AIB13694
UniProt:
A0A060DRT2
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Position
AbAZ39_p1:complement(613806..614948)
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AA seq
380 aa
AA seq
DB search
MATDGDSSMDGVTVTDPRTDAEEAAACAGLSYVCDDEPGIRRRRAGKGFSYRWPDGTRVT
EEDTLERIRKLAIPPAYRGVWICPDPDGHLQATGRDTRGRKQYRYHPRWTEMREGTKFGR
MLDFCRALPAIRRQVDGDLARRGLPREKVLAAVVRLLETTLIRVGNESYARENSSYGLTT
LRDDHADIEGSEIRFTFKGKSGKEWNVALKDRRLARVVSACRDVPGDELFQYVDRDGQRH
AVSSGDVNEYLRAVTGQDFTAKDFRTWAGTVLAAMALREFETFDSAAKAKRNVTHAIEQV
AARLGNTASVCRKSYVHPEILDAYLEGNLLDSLTREVETELREELPELEAEEAAVLAFLR
GRLERERRSRASESRRRRAA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
ctggcaaccgatggggattccagcatggacggagtgacggtcaccgatccccgcaccgac
gcggaagaggccgcggcctgcgccgggctgagctatgtctgcgacgacgagccgggcatc
cggcgacgccgcgccggcaagggcttctcctaccgctggcccgacggcacgcgcgtgacc
gaggaggacacgctggagcgcatccgcaagctggcgatccccccggcctaccgcggcgtc
tggatctgcccggacccggacggccacctccaggccacgggccgcgacacgcgcgggcgc
aagcaataccgctaccacccgcgctggaccgagatgcgcgagggcactaaattcgggcgc
atgctcgacttctgccgcgccctgcccgccatccgccgtcaggtggacggcgacctcgcc
cgccgtggcctgccgcgggaaaaggtgctggccgccgtggtgcggctgctggagaccacg
ctgatccgcgtcggcaacgaaagctacgcgcgcgagaacagcagctacggactgaccacc
ctgcgcgacgaccacgccgacatcgagggatcggaaatccgcttcaccttcaagggcaag
tccgggaaggaatggaacgtcgcgctgaaggaccgccgcctcgcccgcgtcgtcagtgcc
tgccgcgatgtgcccggggacgagctgttccagtatgtcgaccgcgacgggcagcgccac
gcggtgagttccggcgacgtgaacgagtatctgcgcgccgtcacgggccaggacttcacc
gccaaggacttccgcacctgggccggcaccgtcctggccgccatggcgctgcgcgagttc
gagacattcgacagcgcggccaaggccaagcgcaacgtcacccacgccatcgagcaggtg
gccgcccgcctcggcaacaccgccagcgtctgccgcaagagctacgtccatcccgagatt
ctggacgcttatctggagggcaacctgctggactccctgacccgcgaggtcgagaccgag
ctgcgtgaggagcttcccgagttggaggccgaggaggccgccgtgctggccttcctgcgc
ggccggctggagcgtgaacgccgatcccgcgccagcgagagccggcggcggcgcgccgcg
tag
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