KEGG   Azospirillum brasilense Az39: ABAZ39_19740
Entry
ABAZ39_19740      CDS       T03288                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
abq  Azospirillum brasilense Az39
Pathway
abq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:abq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ABAZ39_19740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abq03400]
    ABAZ39_19740
DNA repair and recombination proteins [BR:abq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ABAZ39_19740
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ABAZ39_19740
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII DEAD UVR AAA_30 AAA_19 UB2H AAA_16 AAA_22 Met_synt_B12 Kinesin HVO_A0114 Microtub_bd LarB_N NPHP3_N
Other DBs
NCBI-ProteinID: AIB14159
UniProt: A0A2K1G3Y9
LinkDB
Position
AbAZ39_p1:complement(1130362..1132500)
AA seq 712 aa
MSHPVLTALPQKSLPKLEAGKKFELVSEFKPSGDQPRAIGELTEGLRAGEKDQVLLGVTG
SGKTFTMAHVIQHVQRPTLVLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYV
PRTDTFIEKESSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSEMTVDLR
KGQVVAQPDLLRKLTELQYKRNDAAFGRGLFRVRGDTVELFPAHMEDRAWRISLFGDEIE
GIHEIDPLTGEKIASLEAVRIYPNSHYVTPKPTLNQAIEQIKRELKLRLEEFNAQGKLLE
AQRLEQRTTFDIEMMAATGACAGIENYSRYLTGRAAGEPPPTLFEYLPGDALLIVDESHV
MVPQIGGMYRGDRMRKETLSEYGFRLPSAMDNRPLKFEEWEGMRPQTVFVSATPGPWEME
RTGGVFAEQVVRPTGLIDPEVIIRPTETQVDDLIHECKEVVTKGNRVLVTTLTKKMAEAL
TEYMHEAGLRVRYIHSDVETLERIEIIRDLRLGAYDVLVGINLLREGLDIPECSLVAILD
ADKEGYLRSKTSLIQTIGRAARNVEGRAILYADKITGSMQYAIDETARRREKQRAYNLEH
GITPESVKKAIGDILESVYERGDHVTVKTGLNASELVGHNLKSVMADMEKRMKAAAADLE
FEEAARLRDELRRLEAMDLGLEQPGSIGISSARQGRGIPEGAPKKQGRRGRR
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgtcccatcccgtcctgaccgccctcccgcagaagtccctgcccaagctggaggctggc
aagaagttcgaactggtgtcggagttcaaaccctccggcgaccagccgcgcgccatcggg
gaactgaccgaggggctgcgcgccggcgagaaggatcaggtgctgctcggcgtcaccggg
tccggcaagaccttcaccatggcgcacgtcatccagcacgtccagcgccccaccctggtg
ctcgccccgaacaagacgctggcggcgcagctctacggagagatgaagtccttcttcccg
aacaacgcggtggaatacttcgtttcctactacgactactatcagccggaagcctacgtt
ccgcgcaccgacaccttcatcgagaaggaatcctcgatcaacgagcagatcgaccggatg
cgccactcggcgacgcgggcgctgctggaacgggacgacgtcatcatcgtggcgtcggtg
tcctgcatttacggtatcggttcggtcgagacctattcggagatgaccgtcgatctgcgc
aagggccaggtggtcgcccagcccgacctgctgcgcaagctgaccgagcttcagtacaag
cgcaacgacgcggccttcgggcgcggcctgttccgagtgcgcggcgacacggtggagctg
ttccccgcccacatggaggaccgcgcgtggcgcatctcgctgttcggcgacgagatcgag
ggcatccacgagatcgatccgctgaccggtgagaagatcgcctcgctggaggccgtgcgc
atctatcccaacagccactatgtgacgcccaagccgacgctcaatcaggccatcgagcag
atcaagcgcgagctgaagctccggttggaggagttcaacgctcagggcaagctgctggag
gcgcagcggctggagcagcgcacgaccttcgacatcgagatgatggcggccaccggcgcc
tgcgccggcatcgagaactattcccgctatctgaccggccgcgcggcgggcgagccgccg
ccgacgctgttcgagtatctgccgggcgacgcgctgctgatcgtcgacgagagccacgtc
atggtgccgcagattggcggcatgtaccgcggcgaccggatgcgcaaggagacgctgtcc
gaatacggcttccgcctgcccagcgccatggacaaccgcccgctgaagttcgaggagtgg
gagggcatgcgcccgcagacggtcttcgtctcggccacccccggcccctgggagatggag
cgcaccggcggcgtcttcgccgagcaggtggtccgcccgaccggcctgatcgacccggag
gtgatcatccgtcccaccgagacgcaggtggacgacctgatccacgagtgcaaggaggtg
gtgacgaagggcaaccgcgtgctggtcaccacgctgaccaagaagatggccgaggcgctg
accgaatacatgcacgaagcggggctgcgcgtgcgctacatccactccgacgtggagacg
ctggagcgcatcgagatcatccgcgacctgcggctcggcgcctacgacgtgctggtcggc
atcaacctgttgcgcgaggggctggacatccccgaatgctcgctggtcgccatcctggac
gccgacaaggagggttatctgcgctccaagacctcgctgatccagaccatcggccgcgcc
gcgcgcaacgtcgaagggcgggcgatcctctacgccgacaagatcaccggcagcatgcag
tacgccatcgacgagacggcgcgccgccgcgagaagcagcgggcgtacaatctggagcac
ggcatcacgccggaatccgtaaagaaggcgatcggcgacattctggagagcgtgtacgag
cgcggcgaccacgtcaccgtgaagaccggcctgaacgcgtcggaactggtcggccacaac
ctgaagtccgtgatggccgacatggagaagcgcatgaaggccgccgccgccgatctggag
ttcgaggaggccgcccgcctgcgcgacgaactccgccggctggaggcgatggacctcggg
ctggaacagccgggcagcatcggcatcagctccgcccgccagggccgcggcattcccgag
ggggctccgaagaagcaggggcgccggggacggcgctga

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