Acinetobacter baumannii MDR-TJ: ABTJ_01257
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Entry
ABTJ_01257 CDS
T02045
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
abr
Acinetobacter baumannii MDR-TJ
Pathway
abr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABTJ_01257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abr03019
]
ABTJ_01257
Enzymes [BR:
abr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABTJ_01257
Messenger RNA biogenesis [BR:
abr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABTJ_01257
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
Cas3-like_C_2
CMS1
FACT-Spt16_Nlob
YtzH
Motif
Other DBs
NCBI-ProteinID:
AFI94874
LinkDB
All DBs
Position
1312657..1313808
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AA seq
383 aa
AA seq
DB search
MTSGFETLNLHPQLKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLIS
VINDLLNNPVQEQRFRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDK
QKKQLDANFVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRY
SPRKEQRQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAKQDKYR
LLQDILREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQG
KHNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA
FYLPEIEKAIGKKLPLTRLDGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacatctggttttgaaaccttgaatttacatccgcaacttaaaaaggcgattgatgct
ttagggtttactcaaatgaccccaattcagcaaaaggttttaaaatatacattagccggg
catgatgcaattgggcgagcacagacaggaacaggtaagactgctgcctttctgattagt
gtaattaatgatttgctcaataatccggttcaggagcaacgcttccgtggtgagcctcgt
gctttaatcttagcacctactcgtgagttggcattgcagattgaaagtgatgcaaaatct
ctcacaaaattttctaatttacacctagtgaccctattaggtggcgttgatttcgataag
cagaagaagcaacttgatgctaattttgtcgatatcatggttgccacaccagggcgttta
attgattttgtagaacaaaaagaagtttggctcgatcaaattgaatttttagtgattgat
gaagctgaccgtttattggatatgggctttattccttccgtaaaacgtattgtgcgttat
tcaccacgtaaggaacaacgacaaaccttaatgttctctgcaacatttagttatgatgtc
ttgaacttggcaagacaatggttatttgaaccagtaactgttgaaattgaacctgaacaa
aagaccaataatgatgtcgaacaacgtgtttacgttgtggctaaacaggataaatatcgt
cttttacaagatattttacgtgaagagccaattgataaagttatgatctttgccaatcgc
cgtgatcaggtacgtcgtctttacgaccatttgaaaaaagatggatacaaagtggggatg
ctatctggtgaaattgctcaagataaacgtttaaaaatgttggagcagtttaagcaaggc
aagcataacatcatgatcgcaaccgatgttgctggtcgtggtattcatgtagacggtgta
tcacatgtagtgaattttacattgcctgagcagtctgatgattatgtccatcgtattggt
cgtacaggtcgtgcaggggcacaaggggtaagtattagtttcttatctgaagatgatgct
ttctatttacccgaaattgaaaaagcaattggtaagaaattgcctctaacccgactagat
ggttattgctaa
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