Acinetobacter baumannii MDR-TJ: ABTJ_03375
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Entry
ABTJ_03375 CDS
T02045
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
abr
Acinetobacter baumannii MDR-TJ
Pathway
abr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABTJ_03375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abr03019
]
ABTJ_03375
03009 Ribosome biogenesis [BR:
abr03009
]
ABTJ_03375
Enzymes [BR:
abr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ABTJ_03375
Messenger RNA biogenesis [BR:
abr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABTJ_03375
Ribosome biogenesis [BR:
abr03009
]
Prokaryotic type
rRNA processing factors
ABTJ_03375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AFI96943
LinkDB
All DBs
Position
3480348..3483680
Genome browser
AA seq
1110 aa
AA seq
DB search
MKRMLINATHAEEVRVALITGNRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYFQADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEILASLNVPRGMSVIVRTAGIGRTQEELQL
DLQHLLDLWAQIQGTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKERNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSGVRVTVLPHPHLETPHY
EIAYNPDGFAPSSYERTEATRSSEKELGYESSEWHLEEADHGHAHVTATASTHAAAQKKA
NHATQPVAQPSAQKAASPCAWLENLFVQKQAQTVDQSRSAQNAAAAIEQMVNTGAVSRGQ
FGQVAVPAVAEVAPVQSNNAYISQSPVKQDVREHVEKDDKSQQQRQNNKKRKHKEQREQH
HQSHEQQHQVHEEVVQLSRQEQRELKRQQKRQQQQDQQHQNNDVQHTENAVPRRDRNNQQ
RPNRPNRHRDPSVLNENQNTPVVIDEKQIKVDVIDAPKHDVMNTALIINVDQGQSEIVAL
TPEHRHVERVETTSTEVAQEPTPAPVVAEKAAVVETKEEAQPSQEAAQPQIKRASNDPRM
RRRQQREAKHAKAATPSIAPSQIPTLAQHTIGSLIRHVYGEDCTVLIEQFGLVPTFNRAL
QKFAEQYASTLVVEVTAETEEKKPVTRDAELPSHKPAEEAEPAPVLPLTPPQAPAPRVAN
DPRERRRLAKLAAEQAFEQVKQQHSAQEEVATPAPVAEETVAAPTAETQATVEPAQQPLE
LNQSTEVVQPEAAPAEEKATEETVAEAPAAKEPAPSKAASKAKAAAEETVAPTEATTDAE
SEDVKADKDKPSRPRRPRGRPPKKANPVAE
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaactcatgccgaagaagttcgcgttgcacttatcact
ggtaatcgtctttacgattttgatttagagaatcgtacccgagaacagaaaaaatccaat
atctataaaggccatgtcacccgcgtagaaccatctttagaagctgtttttgttgaatat
ggcgcaggtcgtcaaggcttcttgtctatgcgtgaaattgcgaatagctattttcaggca
gacccacgtcaaacttcaaacattcgtgaacttattactgaaggcacagagcttttagtt
caggttgaaaaagaagaacgtggtaataaaggtgcagcactttctacgtttatttccctt
gcaggccgttatttagttcttatgccaaataacccgaaaggtggtggtattagccgtcaa
atttcaggttcagtacgtgaagaattaaaagaaattttagcttctttaaatgtacctcgt
ggtatgagcgttattgttcgtactgccggtattggccgtactcaagaagaattacagctc
gatttacaacacttgcttgacctttgggcacaaatccaaggtacagcgagctcaggccct
tctccgatgcttgttcatcaagaagcgggggtagtaacacgtgcaattcgtgattactta
cgtgatgacgttgctgaaatcttaattgatagcgaacaagcttataacgaagcatataac
tttgttaaagcagtgatgcctcgtcaattagacaaattaaaaacttatactttaaacgag
ccattgtttgctcattttggtattgaaagccaaattcaaactgcttacgagcgtgaagta
aaacttccttctggcggttcaattgtgattgaccagaccgaagctttagtttcaatcgat
attaactctgcgaaatcaactcgcggtcatgatgttgaagaaactgcactgaacaccaac
cttgaagcagcagaagaaattgctcgccagcttcgtttacgtgacattggcggtttagta
gttatcgactttatcgatatgactaaagaacgcaatcaacgtatggttgaagcaaaactt
cgtgaagcaacacaaagcgatcgtgcccgtatccagttcggtcaattgtctcgttttggc
ttaatggaaatgagccgtcaacgcttacgcccatcgcttgaagaagcaacaggttatgta
tgccctcgctgtcatggtacaggcatggttcgtgacttacgttcgctttctctttcaatt
atgcgtaaagttgaagagattgcacttcgtgaacgtcatggtgaagttcaggttgaagtt
ccagttgaaatcgcagccttcttgcttaatgaaaaacgccatagtctagtgtatttagag
caaacttctggtgtacgtgtgactgtattgccacacccgcacttagaaactccacattac
gaaattgcatataacccagatggctttgctccatctagctatgaacgtacagaagcaacc
cgttctagcgagaaagagttaggttatgagtcttctgaatggcatttagaagaagcagat
catggccatgctcatgtaactgctacagcttcaactcatgctgcggctcagaaaaaagca
aatcatgcaactcaacctgtagcacaaccttctgctcaaaaagcagcaagcccttgtgca
tggttagaaaacctgtttgttcaaaaacaagcgcaaacagttgaccaatctcgttcagca
caaaatgctgctgctgcgattgagcaaatggtgaatacaggcgcagtaagccgcggacag
ttcggtcaagtagccgtacctgctgttgcagaagttgcgccagttcaatcaaataatgct
tatatttcacagtcacctgtgaaacaagacgttcgtgaacatgttgaaaaagatgataaa
tctcagcaacaacgtcagaacaacaaaaagcgtaaacataaagagcaacgtgaacaacat
caccaatcacatgaacagcaacatcaagttcatgaagaagtggttcaattgtcacgccaa
gaacaacgtgagttaaaacgtcagcaaaaacgtcaacagcagcaagatcagcaacatcaa
aataatgatgtacaacacactgaaaatgctgtgccacgccgtgaccgtaataatcaacaa
cgtccaaaccgtccaaatcgccaccgcgatccaagtgtattaaatgaaaatcaaaataca
ccggttgttattgatgaaaaacaaattaaggttgatgtgattgatgcacctaagcatgat
gtcatgaacactgctttaatcatcaatgttgatcaaggtcaaagtgagattgttgcactt
acgcctgagcatcgtcacgttgagcgagttgaaacgacttctactgaagttgctcaagag
ccaactccagctcctgttgtagccgagaaagctgctgtagttgaaaccaaagaagaagct
cagccaagccaagaagctgctcagccacaaatcaaacgtgctagcaatgaccctcgtatg
cgtcgtcgtcagcaacgtgaggctaaacacgctaaggcagctacgccatctattgcgcca
tcgcaaattccaactttggcacaacacacaatcggtagtttaatccgtcatgtgtatggt
gaagattgcaccgtattgattgaacaatttggtctagtcccaacgtttaatcgtgctttg
cagaaatttgcagaacagtacgcaagtacgttagtagttgaagttactgctgaaacggaa
gagaaaaagccggtaactcgtgatgcagaacttccaagccacaaaccggctgaagaagca
gaacctgcaccagtacttccgcttactccgccgcaagcaccagctccacgtgttgcaaat
gacccgcgtgagcgtcgtcgtttagcaaaacttgctgcggaacaagcatttgagcaagtg
aaacaacaacattctgctcaagaagaagttgctactcctgctcctgtagcagaagaaacc
gttgctgctccaactgctgaaacacaagcaacagttgaaccagcacaacaaccgcttgaa
cttaatcagtcaactgaagtggtacaacctgaagctgctcctgcagaggaaaaagctaca
gaagaaacagtagctgaagctcctgcagcgaaggaacctgcgccatcaaaagcagcaagc
aaagcaaaagcagcggctgaagaaacagtagctccgactgaagcaacaactgatgccgaa
tcagaagacgttaaggcagataaggacaaaccgagccgccctcgtcgccctcgtggccgt
ccgccaaaaaaagctaatcctgtagctgagtaa
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