Paracholeplasma brassicae: BN85300220
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Entry
BN85300220 CDS
T03095
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
abra
Paracholeplasma brassicae
Brite
KEGG Orthology (KO) [BR:
abra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abra03400
]
BN85300220 (sbcD)
DNA repair and recombination proteins [BR:
abra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN85300220 (sbcD)
Archaeal homologous recombinant proteins
BN85300220 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Metallophos_3
ABC2_membrane_3
Motif
Other DBs
NCBI-ProteinID:
CCV65043
UniProt:
U4KQR5
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All DBs
Position
28123..29310
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AA seq
395 aa
AA seq
DB search
MKILSIGDLHLGKIVNGYSLLTHQIESLNQVKKALRDHQVDLLMITGDLYDRAIPPKEAI
KVFDNFLNDVLKENIKVSYIAGNHDSYERTSFLSDVLKGTSLFIGKEFDQTIDSFTLKEG
NQTYRFYLIPFMPYQYVREILNDDSIDCFQKSYEAMLKTIELNDNEINLLMTHAFIGHAG
TNPEVSDSEKTLAVGGLDFVDSQLFEAFDYTLLGHIHKPQSVYYDNVRYTGSIYKYSFSE
ETHQKSMLLLEINSKEDIKQTLIPIHMSKEWHTLSMSFDEIINNEALISKHQNDYVRIRL
TDEIDVSDGVARLKQRFLYLMEFSYQKDAEFVSLGGAVTDQLAKDMLNKENPEKTMRSLF
IEFSRTQANLELDEVDLKIVEETIEELIRGNNDEN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctttcaattggtgatcttcacctaggcaaaattgtgaatgggtattccttg
cttactcatcaaatagagagtttgaatcaagtaaaaaaggcgctaagagatcatcaagtg
gatttactgatgattacaggtgatttatacgaccgtgcgattccaccaaaagaagcgata
aaggtctttgataacttcttaaatgacgtcttaaaagaaaacattaaggtaagctatatt
gcaggtaaccacgactcctacgaacgtacctcttttttaagtgatgttttaaaaggcact
tctttattcataggaaaagagtttgaccaaaccattgattcattcacacttaaggaaggt
aatcaaacctatcgtttttatctaatcccattcatgccttatcagtatgttagagaaatc
ttgaacgatgattcaatcgattgttttcaaaagagctatgaagcgatgttaaaaacaatt
gagttaaatgacaacgaaatcaatctattgatgacacatgcatttattggtcatgcgggt
actaatccagaggtttcagactcagaaaaaacacttgcagtgggtggtcttgattttgtt
gatagtcaattatttgaagctttcgattatacgcttttagggcacatccataagcctcaa
tcggtttattacgacaacgttagatacacgggatcgatatataaatattcctttagtgag
gaaacacaccaaaaatcaatgttactactagaaatcaactcaaaagaagacattaaacaa
accttgattccaatacatatgtcaaaagaatggcacacgttatcgatgagctttgatgaa
atcatcaataatgaggctttaatcagtaagcatcaaaacgactatgttcgtattcgttta
acggatgaaatcgatgtgtctgatggggtagctagactaaaacaacgatttttgtacctg
atggagtttagttatcaaaaagatgctgagtttgtttcacttggtggggctgtaactgac
caattagccaaagatatgttaaataaagaaaacccggaaaaaacaatgaggtcacttttt
atcgaattttcaagaacacaagccaacctagaattagacgaggtggatttaaaaatcgtt
gaagagaccatcgaagaactcataagggggaataacgatgagaattaa
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