Paracholeplasma brassicae: BN85300230
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Entry
BN85300230 CDS
T03095
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease, subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
abra
Paracholeplasma brassicae
Brite
KEGG Orthology (KO) [BR:
abra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abra03400
]
BN85300230 (sbcC)
DNA repair and recombination proteins [BR:
abra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN85300230 (sbcC)
Archaeal homologous recombinant proteins
BN85300230 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CCV65044
UniProt:
U4KSI5
LinkDB
All DBs
Position
29300..32374
Genome browser
AA seq
1024 aa
AA seq
DB search
MRIKQLDIQAFGPFGGFESIDFKQINKKQLFLITGNTGAGKTTIFDSVCFALYGKTSGSQ
RNEPENLRSHFAIEELDTYVRLIFEVNKETYEIKRYPKQQRYSKRTKGYVSKNQTIEFKS
LNQPTGILTKIQEVDQKILEVIGLTYEQFRQIVMLPQGEFQKLLTSKSDDKTEIFRKIFQ
TESFEEFQNRLFEKRNNAFKQIEKDINQLELIKKQLSSSSEPLSLLLDNEAVSYEDMIKE
LDSYLQKQQVALQIKKDALKEEEVLLNQARQSYQYNEQQNKYLDEQATLKQQKHSLESQS
QFIESLKIELDQYEQTRAHVITYQDYVNSNEEINRLNIMVEALHKQLSEAKQAFLQAEEA
QKAVTTLEKERDNQRNIESDLKRELQKLKDLKNDEAEFTRFNDELEQLEKQSLELNKDVA
LKKKSQQALEETIKTSELKIKQIGPLYQTIETETNEQKKLEELSQIYDTYIKEKESYSQL
LSKLDIEDKTFKETRTIYETTKQAYHHSLVDVLRKELVDNEPCPVCGSTNHPQKALTKER
SFPTKEEVMKAESIYLESLKQKERLETSLNEKRDVILALELKLPNEKESISNDLEIKKAH
VNKIKQEITNLEHLRETIENQNRAVKSLLNQIESINHSVHQNELLKAKSQEKIRKQNELI
LKYQNELKNKDDQMVVLELNTIDEQIKQIEQTIKTLNEDHRKKELIYKEVELNLSNTKKR
AEEQQTKNKQSKRVLDSFLERKQMSLETFKQILSTKDIKEKQQKVNEYTKKEIELQTSLN
KLMSLITIDQKVDLETLKESLFSLEQSFKHNQVAIQNEGFYLEETAKRVVEFKTTYDSYI
AYGKTFERIKRLSDLSRGLTYNKVSFERYVLSYFFDQILRKANLKLAFMTSNRYYLKRKE
DKSRGNQTSGLDLQIYDRNTTRVRDVETLSGGETFKASLCLALGLAEVIKETSGGIEMDT
MFIDEGFGTLDQESLDQAIDVLMNLNEEGRIVGLISHVGDLKSVIETQIEIEVSKTGSTI
RKED
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgagaattaaacaattagatattcaagcgtttggcccttttggaggatttgaatccatc
gattttaaacaaatcaataagaaacagttattcctaataaccgggaataccggtgcaggc
aaaacgaccatctttgatagcgtctgtttcgccttatacggtaaaacctcaggttcacaa
cgaaatgaacctgaaaatcttagaagtcattttgcaatagaagaactcgatacgtatgtc
aggttgatctttgaggtcaataaagaaacttatgaaatcaaaaggtatcccaaacaacaa
cgctattcaaaacggaccaagggctatgtgtcaaaaaatcaaaccatcgaatttaaatcc
ctaaatcaaccaaccggaatcttaactaaaatacaagaagtcgatcaaaaaatcttagaa
gtcatcggtctaacctacgaacagtttagacaaattgtcatgctacctcaaggtgagttt
caaaaactactgacgtcaaaaagtgacgataaaactgaaatttttagaaaaatatttcag
accgaaagttttgaagaatttcagaatcgactatttgaaaaaagaaataacgcattcaaa
caaatcgaaaaagacattaaccaactagaactcatcaaaaaacagctaagcagttcatca
gaaccactgagtctacttttagataatgaagctgtgtcttatgaagacatgataaaagaa
cttgatagctacttacaaaaacaacaagtagcgcttcaaataaagaaagacgcattaaaa
gaagaagaagttcttctaaatcaagcgcgtcaatcatatcaatacaacgagcaacaaaac
aaatacctagatgaacaagcaaccctaaaacaacaaaaacatagcttagagagccaatca
cagttcattgaatcactcaaaatcgaactagatcaatacgaacaaaccagagcgcacgtc
ataacctatcaagactatgttaattcaaatgaagagattaatagactgaacatcatggta
gaggcattacataaacaattaagtgaagccaaacaggcatttcttcaagcagaagaggca
caaaaagccgttacaacgcttgaaaaagaaagagataatcaaagaaacatagaaagtgat
ttgaaacgtgaacttcaaaagcttaaagacttaaaaaacgatgaagcagaatttacacga
ttcaacgatgaacttgaacaactagaaaaacaaagtcttgaacttaataaagatgtcgca
cttaagaaaaaatcccaacaagcgcttgaagaaaccataaaaacatcagaactgaaaatc
aaacaaatagggccactttatcaaacaattgaaacagaaacaaacgaacaaaaaaagtta
gaagaactaagtcaaatatatgacacctatattaaagaaaaagagagttacagtcaactg
ctttctaagcttgatatcgaagataaaacctttaaagaaacaagaacaatttatgaaaca
accaaacaagcctatcatcactcgctcgttgacgtgctaagaaaagaattggtcgataat
gaaccatgccctgtttgtggatcaaccaatcacccacaaaaagcattaactaaagaacgc
tcttttccaaccaaagaagaagtcatgaaagcagaatcgatttacttagaatcattaaaa
caaaaagaacgtttagaaacatccctaaatgaaaaaagagacgtcattttagcattagaa
ttgaagcttccaaacgaaaaagaaagtataagtaatgacttagaaattaaaaaagcgcat
gtcaataaaattaagcaagagattacaaacttagaacacttaagagaaacaattgagaat
caaaatcgcgcggtaaaaagtctacttaaccaaattgaatcgattaatcactcagttcat
caaaacgaacttctaaaagccaagagtcaagaaaaaataagaaaacaaaacgaactgatt
ttaaaataccaaaatgaattaaaaaataaagacgatcaaatggttgttttagaattaaat
acgattgatgaacaaatcaaacaaattgagcaaacaatcaaaacactaaatgaagaccat
cgaaagaaagagctcatctataaagaagtagagttgaatctatcaaacacaaaaaaacgc
gctgaagaacaacaaacgaaaaacaaacaatcaaagcgagtattagatagcttcttagag
cgtaagcagatgagtttagagacatttaaacaaatactttcgaccaaagacattaaggaa
aaacaacaaaaagtcaacgaatacaccaaaaaagaaattgaactccaaacttccttgaat
aaactgatgtcacttataaccatcgatcaaaaagttgatttagagacactaaaagaatca
cttttttcccttgaacaatcctttaagcataatcaagtcgctattcaaaacgagggtttc
tatttagaagaaacagctaagcgagtcgttgagtttaaaaccacgtatgattcctacatt
gcctatggtaaaacctttgaaagaattaagcgtctttcggatttatccaggggtctaact
tataataaggtctcttttgaacgttatgtattatcttatttctttgatcaaatactaaga
aaagcaaacctgaagttagcctttatgacttcaaacaggtactatctcaaacgaaaagaa
gataaatcaaggggcaaccaaacctctggactggacttgcaaatttatgaccgaaacacc
acgagagtcagagacgttgaaaccctatctggtggtgaaacctttaaagcctctctatgt
ttggccttaggtttagctgaggtcatcaaagaaaccagtggtggcattgaaatggatacc
atgtttatcgacgaaggttttggcacacttgaccaagagtctcttgaccaagcgattgat
gttctaatgaatctaaatgaagaaggacgcatcgttggtttaattagtcacgtcggggat
ttaaaaagcgtgattgaaacgcaaattgaaattgaggtaagtaaaacaggcagtaccata
cgaaaggaagattaa
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