Acholeplasma brassicae: BN85302810
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Entry
BN85302810 CDS
T03095
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
abra
Acholeplasma brassicae
Pathway
abra00040
Pentose and glucuronate interconversions
abra01100
Metabolic pathways
abra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
abra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BN85302810
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN85302810
Enzymes [BR:
abra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BN85302810
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Gene cluster
GFIT
Motif
Pfam:
aBig_2
Pectate_lyase_4
DUF2606
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
CCV65302
UniProt:
U4KME2
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Position
301372..303258
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AA seq
628 aa
AA seq
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MTKWMALGLLISLMFVVTACQKNNAEELFKEVIEAVTFDSEVHNDLYLPNRYKEVLITWE
SSNEEILSSKGKVNRPLFDEENQEVTLTMILNYQNQVKRVLFTLTVVKNEQTREEILKAV
LDQIEFGNTITKSLNLVYEVNGVLLSYQSSHPMDLTNEGDLLRRPYYNEDDLSVTLTVTG
FDGEYEMSKDITLIILKEEKLETNVTGFASIYFDESVFNEGNYYVVSNEKELIEALSMTG
DKAARVIEIMNDLNLGYHYVRKTYPELALDSRVFRNHNTPLTHPDLIEHGVSRIQIRDRS
EGLSHGVGLKLFSKNGSTIKYATFLIKNSTNVWIENLSFDGIWEYDDSFDYDRNDYDYIT
IEDSKNVFINHVTLHQAYDGLIDVKGYSDHITISNSLFVARENEHIRRQVDYLEDNRSQF
PTYNAYRTLGMTKEELVTLLSFQKKGHLIGSGEFNDENKYYTVTLSNNHYINILDRIPRL
RGGDVHMYNIIHDASEANAFRTYVNVTYKISFTNQGIVTTENGAVLMENSIFKGIDTPIR
NNQKSGAEGYTGKFLVRASIYQLGNYYDYSSSTDKLTIWRANDAAVLPFELNNYDEIPYD
YQMISALDLESHFEVNRVGANNNLQGEK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatggatggcactaggtctcttgatttctttaatgtttgtagtaaccgcatgt
caaaaaaataacgctgaagaattatttaaagaagtcattgaagcagtaacttttgactct
gaagtccataacgatttgtatttgccaaatcgttataaagaagttttgattacttgggaa
tcgagtaacgaagaaattctttcctcaaaagggaaagtgaatcgtccgctttttgatgag
gaaaaccaagaagtgacactaacaatgattcttaattatcaaaaccaggtaaagcgcgtt
ttatttacattgactgtcgttaaaaacgaacaaacaagagaagagatactaaaagcagta
ttagaccaaattgaattcggtaacacaatcacaaaaagtttaaatttagtctatgaagtt
aatggggttttactctcttatcaatcaagtcacccaatggatttaactaatgagggtgac
ttactaagaagaccttactataacgaagatgacttgagcgttactttaactgtgacgggt
tttgatggcgaatatgagatgtcaaaagacatcacattgattattttaaaagaagagaaa
ttagaaaccaacgtaacgggttttgcaagtatttactttgatgaatcagtctttaatgaa
ggtaattactacgtggtttcaaatgaaaaggagttaattgaggcactttcgatgaccggt
gataaagccgctagagtgattgaaattatgaacgatttaaaccttggttatcactatgtg
agaaaaacctacccggaacttgccttagattcgagggtatttagaaatcacaacacaccc
ttgacgcacccagatttaattgagcatggtgtttcaagaatacaaatcagagatcggtcg
gaaggtcttagccatggggttggcctcaaattgttttcaaaaaacggaagtacaattaaa
tacgcaacctttttaataaagaacagtacgaacgtatggattgaaaatttgagttttgat
ggtatttgggaatatgatgattcgtttgattacgacagaaatgactacgattacatcacc
atcgaagactcaaagaacgtatttatcaatcacgtaacgcttcaccaagcctacgatggc
ttaattgatgtcaaagggtacagtgatcacatcacaatttcaaactctctatttgtcgca
agagaaaacgaacacatcagaagacaagtggattatctagaggataatcgaagtcaattt
ccaacgtacaatgcctatcgtacgcttgggatgaccaaagaagaacttgtgacactgctt
agttttcaaaagaaggggcatctaatcggctcaggtgagttcaatgatgaaaataagtac
tacacggtaaccctatcaaacaaccactacattaatatcttagatcgaatccctagatta
agaggtggtgatgtacacatgtataacataatacacgatgcgtctgaggcgaatgcgttt
cgaacttatgtgaatgtgacttacaagattagttttactaaccaaggcattgtcacaact
gaaaacggtgcagtgctcatggaaaattcaattttcaaagggatcgatacacccattcga
aataaccaaaaaagtggggctgaaggctacacagggaagtttttagttagagcttctatt
tatcaactaggcaattattatgattattcaagttcgacggacaaactcacaatctggcgt
gcaaatgacgcagcagtcctaccttttgaattaaataactatgatgaaatcccctacgat
taccaaatgattagtgcacttgatttagagagtcactttgaggttaaccgtgtgggtgca
aataataacttacaaggagaaaaatag
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