Paracholeplasma brassicae: BN85305120
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Entry
BN85305120 CDS
T03095
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type (PolIII)
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
abra
Paracholeplasma brassicae
Pathway
abra03030
DNA replication
abra03430
Mismatch repair
abra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN85305120 (polC)
03430 Mismatch repair
BN85305120 (polC)
03440 Homologous recombination
BN85305120 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abra03032
]
BN85305120 (polC)
03400 DNA repair and recombination proteins [BR:
abra03400
]
BN85305120 (polC)
Enzymes [BR:
abra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN85305120 (polC)
DNA replication proteins [BR:
abra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN85305120 (polC)
DNA repair and recombination proteins [BR:
abra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN85305120 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
HHH_3
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
CCV65533
UniProt:
U4KR85
LinkDB
All DBs
Position
569668..574131
Genome browser
AA seq
1487 aa
AA seq
DB search
MDKFELFIKQSNFKDAVLNTATLTTVEVNPNLKKWTFKLVFDQAPSPNSLDLFLKQLSLY
FKVPSHVLHMDWFISFKDKESWKKDAMLYYQWMINQIVEEKGSISVFKNYEVTFKENKYL
IYIDQSSTHLNRHIKTFDQFFNKYGLQATFELVVKQELVETKTLIEADEINTIKEIETRV
TQKRSYKEEPKQDLKNFKRVYKATKVSPINQVPKDNYELDKHQNTVGDASFAIEGEIIKQ
EIRTLKNSSLLTLTVADEDDAIVVKQFLYKEKDIEEASKYKIGDIVNCNGRATYDTFAKD
VVIIANLIAFIEKTSKKERKDTAKEKRIEFHLHTKMSNMDGLTEPSDYVNQALKWGHKAI
AFTDHDGLYAYPDIYKATKGKDIKPIYGVELNFIDEKGFKMAFDDKDILLKNATYVVFDI
ETTGLSNQRDKIIEISAVKIENLAITDSFSYFINPEQKLSDFTTSLTSITDDDLKDAPTI
NEVLPKFIEFISDAILVAHNASFDIGHLYANMEKLGLEEKRFPVIDTLNVARYFYSDQLK
RFNLKAVSKLFKVKLEQHHRAIADAKATADVFIQMLQDFFKKEIYLHSDINKVINTEEAW
KHGFPNHINLLVQNQVGYKNLFKLVSDTLTTHFFKGPRLLKSVLDTFREGILVGSGCYKG
EVFETALNRSDEELSEVIAYYDYIEVQPPQAYRHLRQDLGVDADRIIQGLIKKIINEAKR
QKKIIIATGDVHYLNESDAIYRDIYIRTKLVGGGIHDLASYDEAPLQYFLTTDEMLKAFE
FLGSELAHEIVVKNTNLLNNKIDLIQAFPKSLYSLRDDAFRDKLGVTSIKTEIDRLVYSK
AHELYGKTLHPIVSARITRELKNIIENEFGPIYYISYLLTKKSLDDGYLVGSRGSVGSSL
VATLMEITEVNPLKPHYRCPNGDFSVFKMSKEEIEQYGISDDEKAFQPYLSQIQSGFDLE
DRVCPKCGAKMQKDGHDIPFETFLGFNGDKVPDIDLNFSGEYQAKAHNYVKELLGADHAF
RAGTIQTVAERNAFGYVKGYLEDKQIANVRNAQVERLAKNIEGVKRSSGQHPGGIVVVPE
EKEIFDVTPIQFPADDVNAEWKTTHFDYHSFEDNLLKLDILGHDDPTMIKFLMDYVYKYP
EEFPFKRAQDIPVDDKKVYELFCSTEVIGVSKEDINSEVASYGIPELGTNFVRQMLSDTK
PSSFGGLVKISGLSHGTDVWLKNAQDLVLGKKEEYGQIEFDKVIGCRDDIMVNLMQFGMD
PFKSFEIMEFVRKGKPAKDKEKWAKYEAEMNRNNVPKWYIWSCSQIKYMFPKAHATAYVL
MAMRIAWFKVYHPVLFYSAFFSKRATQFEHETMVAGSNAIRNRIRDLEGQFNLSVKDEAI
LTTLLISLEMTRRGHKFLKVDINLSEATEFKIEGRNLRMPFTSVDGLGENVAYDIVEKRN
EKPFTSKKEVKERTRINKTVFEKMEDYGSFDDLIEENDVIEQGLFAL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
gtggataagtttgaattatttataaaacagtctaattttaaagatgccgtgttaaatacc
gcaacacttacaacggttgaggtcaatccaaacctcaaaaaatggacctttaaactcgta
tttgatcaagcaccaagtccaaatagtttggacttgtttttaaagcagttatcgctttac
tttaaagtcccaagccacgtcttgcatatggattggtttatctcgtttaaagataaagag
tcttggaaaaaagacgcgatgctctattatcagtggatgattaatcaaattgtcgaagaa
aaaggatctatctcagtatttaaaaattacgaagtcacgtttaaagaaaacaagtattta
atctacatcgatcaaagctcgacgcatttaaatagacatattaagacctttgatcagttt
tttaacaaatacggactacaagcgacctttgaattagtcgtcaaacaagaattggttgag
acaaaaacactgattgaagcagatgaaatcaatacaatcaaagaaattgaaaccagggtc
acacaaaaaagaagttataaagaagaaccaaaacaagatttaaagaacttcaaacgggtg
tataaagcaaccaaagtctcaccaatcaatcaagtaccaaaagacaattacgaattagat
aagcatcaaaacaccgttggggatgctagtttcgccattgaaggtgaaatcatcaaacaa
gaaattcgtacacttaagaactcgtcactcttaaccttaacggttgctgatgaggacgat
gcgattgttgttaagcagtttttatataaagaaaaagacattgaagaagcctcaaaatat
aaaattggcgatatcgtcaattgtaatggccgtgcgacttatgacacgtttgccaaagac
gtggtcatcattgctaatttgattgcatttattgaaaaaacatcaaaaaaagaacgtaaa
gatacagcaaaagaaaagcgcattgaatttcatttacataccaagatgtcgaacatggac
gggctgactgaaccaagtgattacgtcaaccaagcacttaaatggggacataaagccatc
gcatttaccgatcacgacggtttgtatgcttaccctgatatttacaaagccaccaaaggc
aaagacatcaaacccatttatggggtggaactcaatttcattgatgaaaaaggatttaag
atggcctttgatgacaaagacatcttactaaaaaacgcgacctatgtggtctttgatatt
gaaaccacagggctttctaatcaacgagataaaatcattgaaatttctgcggtcaaaatt
gaaaatttagccatcactgattcatttagctatttcatcaacccagaacaaaaattatcg
gattttaccacctcacttacaagcatcaccgatgatgacttgaaagacgcaccaaccatt
aatgaggtactacctaagttcatcgaatttatctctgatgcgattttagttgcacataac
gcctcgtttgatattggccatttatacgccaatatggaaaaattaggcttagaagaaaag
agatttccagtcattgatacactaaatgtcgctagatatttttacagcgaccaattaaaa
cgatttaacttaaaagcggtatccaaactctttaaagtcaaattagaacaacaccacaga
gccattgccgatgcgaaagcaacggcagatgtgttcattcaaatgcttcaagacttcttt
aaaaaagaaatctacttgcattcggatatcaataaagtgattaatacagaagaagcttgg
aaacacgggtttccaaaccacatcaacttgttggttcaaaaccaagtgggttataaaaac
ctatttaaactggtctcagacacactaacgacacatttctttaaaggtccaagactttta
aagagcgtgcttgatacctttagagaaggcattttagtcggtagtggttgttacaaaggc
gaagtctttgaaacagcacttaaccgaagtgatgaggaattatcagaggtgattgcgtat
tatgactacatcgaggttcaaccacctcaagcgtatcgtcatttaagacaagacttaggc
gtcgatgcagatcgcatcattcaaggcttaattaaaaagatcattaacgaagccaaacga
caaaagaaaattattattgccacaggtgacgtccattacttaaatgaatcggatgccatc
taccgtgacatctacattagaactaagctcgttggtgggggtattcacgacttggcttcc
tacgacgaagccccacttcaatatttcttaaccaccgatgaaatgcttaaagcctttgaa
ttcttaggcagtgaactcgcccatgaaatcgtggttaaaaatacgaacctattaaataac
aagattgatctcattcaagccttccctaaatcactttattcacttagagacgatgcgttt
agagataagcttggtgttacctcaattaaaaccgaaattgaccgattggtctatagtaaa
gcccatgaactatacggcaaaacactacacccaatcgtttcagctagaatcactagagaa
ctaaaaaacatcattgaaaatgaatttggaccgatttattatatttcatacttactgacg
aaaaaatcacttgatgacggctacttagttggttcaagaggctcggtgggctcttcttta
gtagcaactctaatggagattaccgaagttaatcctctaaaaccacattaccgttgtcca
aatggggattttagcgtctttaagatgagtaaagaagaaatagaacaatatggtatcagt
gatgatgaaaaagcatttcaaccctatttaagtcaaatccaatcaggctttgatttagaa
gaccgtgtgtgtccgaagtgtggggctaaaatgcaaaaggatggtcatgacatcccgttt
gaaaccttcttaggttttaatggggataaagtgccagacattgaccttaacttctcaggt
gaataccaagcaaaagcacacaattacgttaaagaactattaggcgcagatcacgccttt
cgtgcggggaccattcaaacggtggccgaacgaaacgcctttggttatgtcaaaggctat
ctagaagataaacaaatcgcaaacgttagaaacgctcaagtcgaacgcttggctaaaaac
attgaaggcgtcaaacgaagctcaggtcaacacccgggtgggattgtggtggtacctgag
gaaaaagaaatctttgatgtcacaccaattcagtttccagccgatgacgtcaacgctgag
tggaaaaccacacactttgactaccactcatttgaagataacttactaaaactagacatc
ctaggtcacgatgacccaacgatgatcaagttcttaatggactatgtctacaaatatcca
gaagaatttccatttaaacgtgcgcaagacatcccagtggatgacaaaaaagtctacgaa
ctgttttgttcaaccgaagtcattggtgtctcaaaagaagacatcaacagtgaggttgcc
tcttatgggattccagagcttgggacaaactttgttcgtcaaatgttatcagacactaaa
ccaagttcgtttggtggattagttaaaatatcgggtctttctcacgggactgacgtgtgg
ttaaaaaatgcccaagacttggtcttaggcaaaaaagaagagtatggccaaattgaattc
gataaggtgattggctgtcgtgatgacatcatggtaaacttaatgcagtttgggatggac
ccattcaaatcgtttgagattatggagttcgttagaaaaggtaaaccagccaaagataaa
gaaaaatgggcgaaatacgaagcagaaatgaatcgtaataacgtgcctaagtggtatatt
tggagctgcagtcaaatcaagtacatgtttccaaaagcgcacgcgacggcttatgtttta
atggccatgcgtattgcttggtttaaagtgtatcacccagtgttattctatagtgcgttt
ttctcaaaacgtgccactcagtttgaacatgagacgatggtcgcaggatcaaatgcaatt
agaaatcgcattagagacttagaaggtcagtttaatttatcagtgaaagacgaagcaatc
ttaacgacgttactgatttcactagaaatgaccagacgtggacataagttcttaaaagtt
gacatcaacttgagtgaggcaaccgaatttaagattgaaggcagaaacctaagaatgcca
tttacctcggtcgatggccttggtgagaacgttgcttacgacatcgttgaaaaacgaaat
gaaaaaccatttacctcgaaaaaagaagtcaaagagcgcacgagaatcaacaaaaccgtc
tttgaaaagatggaagattatgggtcttttgatgacctaattgaggaaaatgatgtgatt
gaacaaggattgtttgcactttag
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integrated database retrieval system
