Acholeplasma brassicae: BN85306350
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Entry
BN85306350 CDS
T03095
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
abra
Acholeplasma brassicae
Brite
KEGG Orthology (KO) [BR:
abra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abra03032
]
BN85306350 (topA)
03400 DNA repair and recombination proteins [BR:
abra03400
]
BN85306350 (topA)
Enzymes [BR:
abra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BN85306350 (topA)
DNA replication proteins [BR:
abra03032
]
Prokaryotic type
DNA Topoisomerases
BN85306350 (topA)
DNA repair and recombination proteins [BR:
abra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN85306350 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Zn_ribbon_recom
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CCV65656
UniProt:
U4KN55
LinkDB
All DBs
Position
713764..715581
Genome browser
AA seq
605 aa
AA seq
DB search
MKTVIIVESPSKSKTIANYVGNDTVVLATVGHIRELATSGTYGLGIDLANDFKPNYKVSK
GKEKVIKELIKQTQKSNVLIATDPDREGEAIAWHVADILNLDLDQDNRITFNEVTKEAVL
KAVSEPRKIDRDLVHSQEARRILDRIIGFRLSKLLQQKIGSKSAGRVQSVALKMIVDLEK
EILAFVPQEYHLLHANFDTFIADYSQNSSKSVKTEIEAQAIINKLQGPFRVKDIQTKKLT
RASNPAYVTSTLQQDGINKLGYSGSRVMGIAQGLYEGKEIKDETVGLITYMRTDSTRLSD
EFIKDAFGEIARLYGKEYIGKPKVGKKKANQQDAHEAIRPTSIKRTPELMKPYLTDQEYK
VYKLIYERALFSLMADAIYEVTSVELENHDEIFKASASKLVFEGHHKANKNYEPAKQTLP
KLAIGDELNATEITSVQQFTKPKSRYTEASLIKDLEELGVGRPSTYAEINKTLLARQYVE
KTKGSLIPTEQGIITSEALDKYFSSIINTEYTQFMENELDEISVGKKVWNVELMDFYKRF
EPILEEAFKDMVKLPPKEVGELCPNCFRSLVIRNNKKGQAFIACSGFTQKPQCTYTRSIE
EKKPE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagtaataatagtagaatcaccatcaaaatcaaagaccatcgctaactacgtc
ggtaacgataccgtcgttttagcaaccgttggtcatatcagagaattagctacctcaggt
acctatggtttgggtatagatcttgcaaatgattttaaacctaattataaagtatctaaa
ggcaaggaaaaagtaatcaaagaattaatcaagcaaactcaaaagagtaacgtcttgatt
gcaaccgacccggaccgtgaaggtgaagcaatcgcgtggcacgtcgcagacattttgaat
ttagacttggatcaagataaccgtatcacctttaacgaagtaacaaaagaggcggtttta
aaggcagtaagcgagccaagaaagattgatcgcgacctagtccattctcaagaagcaaga
cgcatcttagaccgaattattggttttagactttccaagcttttacaacaaaaaataggt
tctaaatccgcagggcgtgttcaaagcgttgcccttaaaatgatcgtagacctagaaaaa
gaaattcttgcctttgtgccacaagaatatcacttactacatgcgaactttgatacgttt
atcgctgactactcacaaaattcgagtaagtcagtcaaaacggaaattgaagctcaagca
atcattaataagcttcaagggccatttagagtaaaagacatacaaaccaaaaaactcaca
cgcgcctcgaacccagcctacgttacctcgacactacaacaagacgggattaataaactt
ggctacagtgggtcacgtgtgatgggtattgcacaaggcctgtatgaaggtaaagaaatc
aaagacgaaaccgttggtttgattacctacatgagaacagactcaacaagactatcggat
gagtttatcaaagatgcattcggtgaaatcgcacgtttgtatggtaaagaatacattggt
aaaccaaaagttggtaagaaaaaagcaaatcaacaagacgctcatgaagcgatcagacca
acctcaattaaacgcacaccagaattaatgaaaccgtatttaaccgatcaagagtataaa
gtgtataaactgatttatgaacgagcactcttctcgctaatggcggatgcgatttatgaa
gtgacgtcggttgagctagaaaatcacgatgaaatattcaaagcgtcggcatcaaaactt
gtctttgaaggtcatcacaaggcgaacaaaaactatgaaccggccaaacaaaccctacca
aaactggccattggtgatgaattaaatgcaactgaaatcacttcagttcaacaatttacc
aaaccaaaatcaaggtatacagaagcaagcctaattaaagatttagaagaactcggtgtt
ggacgaccttcaacttacgcggaaatcaataaaacactattggcacgccaatacgttgaa
aaaacaaaaggatcactcattccgacagaacaaggcatcattacatccgaggcacttgat
aaatatttctcgtcaattattaacacagaatatacgcaattcatggaaaatgagttagat
gaaatctcggtagggaaaaaagtttggaacgttgaattaatggacttttacaaacgtttt
gagccaatattagaagaagcatttaaagatatggttaaactgccaccaaaagaagtcggc
gaactttgtccaaattgttttcgatcactggtcattagaaacaataaaaaaggccaagca
ttcattgcatgttccgggtttactcaaaaaccacaatgtacttacacaagaagcattgaa
gaaaagaaaccagaataa
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integrated database retrieval system
