Acholeplasma brassicae: BN85307870
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Entry
BN85307870 CDS
T03095
Name
(GenBank) Metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
abra
Acholeplasma brassicae
Pathway
abra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN85307870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abra03019
]
BN85307870
Messenger RNA biogenesis [BR:
abra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN85307870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
RMMBL
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
CCV65808
UniProt:
U4KRJ8
LinkDB
All DBs
Position
864520..866193
Genome browser
AA seq
557 aa
AA seq
DB search
MSQIKIYALGGLGENGKNMYCVDVDNQLFIIDAGIKYPTSELFGVDEIVPDYKVLLEQKN
KIKGFFMTHGHEDHIGALPHILNEINVPIYATNFTMELIKDNLKEEGFDLDTLKLNVIDQ
NSIIKFNNVKITFFTTTHSIPESVGIAILTQEGSIIYTSDYTFDQSADPRYQTDFRKINE
LSEKKVLCLMTESLGSGLVLNGSVNKSLEREISTAMSNAEGRIIVSLFSSDLQKIQKVID
IAHKLKKKIAIIGRRAQRIVDIAIEMEYLNIPKESLIALRYIDDKNQNDDKDIVALVTGN
RHEPFYMLQRMCKKVDRLIHINERDTVIVVASPIPGTEKMAARTLDTLYRTDASIKVIDK
KLLSTSHATADEIKMMMNMLKPKYIMPVIGEYRMQHAVMKLACDMGYQQNDVFLMDNGDV
LDFKDGNPVLLKNKIKSGDILIDGSAIGDVNDIVIRDRELLSEDGVLLLIANINPRSKRI
LGDIEIVTKGFVYVKESEELLNGVKEVFMKASEKHLKGKYINWNDLKTSIREDVNKFLYK
ETKRSPITIPVIIATEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaattaaaatatacgccctaggtggtctaggtgaaaatggtaaaaacatgtat
tgtgtggacgttgataatcaactgtttattatcgatgcagggattaaatacccaacatct
gagttattcggagtcgatgaaatcgttccggattataaagtgctattagaacaaaaaaac
aagataaaagggttcttcatgacccatggtcacgaagaccatattggtgcacttcctcat
atattaaatgagatcaacgtaccaatttatgcgacaaacttcacaatggagttaatcaaa
gacaatttaaaagaagaaggctttgacttagatacattaaaattaaatgtcatcgatcaa
aattcgattatcaaatttaacaacgtaaagattacgttttttacgacgactcactcaatc
ccagagtcggttggtattgcgatattaactcaagagggttcgatcatttatacatctgac
tatacattcgatcaaagcgctgatcctaggtatcaaaccgattttagaaaaatcaacgag
ctatcagagaaaaaagtactctgcctgatgactgagtctttagggtctggccttgtttta
aatggttcagtgaataagtctttagaacgagaaataagtaccgcaatgtcaaatgcagag
ggcagaattattgtgtcattattctcatctgacttgcaaaaaatacaaaaagtgatcgat
attgcacataaacttaaaaagaaaattgccatcattggtcgtcgtgcacagcgcattgtt
gatattgcaattgaaatggagtatttgaatattccaaaagaatcattaattgccttaaga
tacatcgatgataaaaaccaaaatgatgacaaagatattgtcgcacttgtgacaggaaat
cgtcatgagccattttatatgttacaacgtatgtgtaaaaaagttgaccgtttaattcat
ataaacgaaagagacaccgttattgtggtcgcttcacctatcccaggaactgaaaaaatg
gcggcaagaaccttagatacactttatcgaacagatgcgagcattaaagtaatcgataaa
aagttattatcgacgtcacacgccacagcagatgaaataaaaatgatgatgaacatgtta
aaacctaaatacattatgcctgtcatcggtgaatatcgtatgcaacatgccgtaatgaaa
ttagcttgcgacatgggctatcaacaaaacgatgtgttcttaatggacaatggcgatgta
ttagatttcaaagatggtaatccagtgctcttgaaaaataaaattaaatcaggtgacatt
ttgattgatggttcagccatcggtgatgtcaatgatatcgtaatcagagacagagaattg
ctaagtgaagatggcgttttattattgattgctaatatcaatccaagatctaaacgcatt
ttaggtgacattgaaattgttaccaaaggctttgtttatgttaaagagtctgaagaatta
ctcaatggtgtaaaagaagtcttcatgaaagcttctgaaaaacacctcaagggtaaatac
atcaactggaacgatttaaaaacaagtattcgtgaagatgtgaataagttcttgtacaaa
gagacaaaacgtagcccaatcacgattcctgtgattatcgcaaccgaagtttaa
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