Paracholeplasma brassicae: BN85311130
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Entry
BN85311130 CDS
T03095
Name
(GenBank) ATP-dependent RNA helicase, DEAD box containing
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
abra
Paracholeplasma brassicae
Brite
KEGG Orthology (KO) [BR:
abra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abra03019
]
BN85311130
03009 Ribosome biogenesis [BR:
abra03009
]
BN85311130
Enzymes [BR:
abra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BN85311130
Messenger RNA biogenesis [BR:
abra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BN85311130
Ribosome biogenesis [BR:
abra03009
]
Prokaryotic type
rRNA helicases
BN85311130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PhoH
AAA_22
Flavi_DEAD
Colicin-DNase
Motif
Other DBs
NCBI-ProteinID:
CCV66134
UniProt:
U4KT62
LinkDB
All DBs
Position
complement(1204073..1205317)
Genome browser
AA seq
414 aa
AA seq
DB search
MFNKEIELKIQALGFKEYTEIQIAIFDAFDKYNRIIGLAPTGTGKTHAYLLPMVNQINKE
LKEVQGVICVPTNDLVIQVEKMVKDLELDIDVKAYYQGKDRNKDLESLRKRQPQLVIATP
GKLQDYAIKENALKIYTTKAIILDEADMMFDLDFITTLDPVFQAIPSSKILMFSATLPEG
LNSWVRKYFGNAFIIDLKDPSKLQIEHALIQTQHETRNTVLKELVKSINPYLCLVFVSRN
DDIEAVFNVLQDEGLKVTMISSKVPLRQRKSLIEEIKALKYQYVVSSDIAARGIDIDGIS
HIINYDLPFELDFYIHRSGRTGRMGKTGVVYSLVTKENSRKIDTLKKKNITFTKYNIRNN
ELIKTERKIKNGISEDELKEIRKIKKPTKVTPNYKKKNKEKIKKARNIVRYGGK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaagaaatagagttaaagattcaagccttaggttttaaagaatatacagaa
atacaaatcgcaatctttgatgcgtttgacaaatacaaccggatcattggtctagcacca
accggcactggcaaaacccacgcgtatttacttccaatggttaatcaaatcaacaaagaa
ctaaaagaagtacaaggtgtgatttgtgtaccgacaaacgatttagtcattcaagtcgaa
aagatggtcaaggatttagaacttgatatcgacgtcaaggcgtactatcaaggtaaagac
cgaaacaaagatttagagtcattaagaaaaagacaaccacaattagtgattgccacacca
ggtaagcttcaagattacgccattaaagaaaatgcgcttaaaatctacacgacaaaagcc
attatcctagatgaggctgatatgatgtttgatctagacttcatcacgaccttagatcca
gtatttcaagccatcccatcaagtaaaatcttgatgttttctgccacactcccagaaggt
ctaaattcatgggtgagaaaatatttcggtaatgcgttcatcattgatttgaaagacccg
tcaaaacttcaaattgaacatgcgttgattcagacacaacacgaaacaagaaacacggtt
ttaaaagagttagttaaatcaattaatccttacctatgtttggtctttgtttcaagaaat
gatgacatcgaagcggtatttaacgtcttacaagacgaaggcttaaaagtaacgatgatc
tcctcaaaagtgcctttaagacaacgaaagagtttaattgaagagattaaagcacttaaa
tatcaatacgtcgtctcaagtgatattgccgcaagaggcatcgatattgatggcatcagc
cacatcattaactacgacttgccatttgaactggatttttatatccaccgaagtggtaga
accggtcgtatgggaaaaacaggtgttgtttattctttagtaacaaaagaaaacagccga
aaaattgacacgttaaagaaaaagaacattacgtttacgaaatacaacatccgaaataac
gagttgattaaaaccgaacgtaaaataaaaaacgggatttctgaagacgaattaaaagaa
attcgtaagatcaaaaaaccaaccaaagtaacaccaaattataaaaagaaaaataaagaa
aaaatcaaaaaagcgagaaacatcgttagatacggaggaaaataa
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