Acholeplasma brassicae: BN85312110
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Entry
BN85312110 CDS
T03095
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
abra
Acholeplasma brassicae
Pathway
abra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN85312110 (dbpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abra03019
]
BN85312110 (dbpA)
03009 Ribosome biogenesis [BR:
abra03009
]
BN85312110 (dbpA)
Enzymes [BR:
abra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BN85312110 (dbpA)
Messenger RNA biogenesis [BR:
abra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BN85312110 (dbpA)
Ribosome biogenesis [BR:
abra03009
]
Prokaryotic type
rRNA helicases
BN85312110 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
Terminase_6N
RRM_PARP14_3
WSD
Motif
Other DBs
NCBI-ProteinID:
CCV66232
UniProt:
U4KP73
LinkDB
All DBs
Position
complement(1310189..1311673)
Genome browser
AA seq
494 aa
AA seq
DB search
MVKSFEQFELIEPLLKALTVLGYESPTDVQSLVIPAIKNNRDVIIKSKTGSGKTAAFAIP
VLNKIIWDKKEPQVLVLTPTRELATQVRDDIFNIGRFLRIKVEAVHGKSSFDNQAKQLKQ
RTHVVVATPGRLIDHILSKTIDLTAITHLVIDEADEMLKMGFIDQVKEVLTHVPMNIQMI
LLSATMPQDIVELSNLHMVNPQLIVAKDSIETENKLLQYYYEVENKEKSDLISSVLIVEN
PNSAIIFCNTKQSVDEVYQILNRKSFSPIKLHGDMDQKDRLKVINDFKHGLYRYLVATDV
AARGLDIDQVSLIINFDLPRNIDNYIHRIGRSARAGASGKAISFISNREYKYLDKITAQT
NQKIEELKIPTELDVKQALEAFNNKQEKTKQIKMDKGFEFKQEIMKLHINAGKKTKMRPS
DIVGAICNIKELTATDIGVITILDISTFVEILNNKGEIVYQALQKTPIKGRMRVVSKANK
TEYEIAYEETTHTK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaatcatttgaacaattcgagttaatcgaacccttattaaaagctttaactgtg
cttgggtatgaatcaccaaccgacgttcaaagtttagtaataccagcgattaaaaacaac
agggatgtaattataaagtcaaaaacaggtagtggtaaaacggcagcttttgctattccg
gttttaaataaaatcatttgggataaaaaggaaccacaggtcttggtcttgacgccgaca
agagaactagcaactcaggttagagacgacatattcaatattggtagatttctaagaatt
aaggtagaagctgtgcacgggaaatcatcatttgataatcaagccaaacaattaaaacaa
cggacacatgttgttgtagcgacaccaggaagactaattgatcatattttaagtaaaaca
attgatctaacagcgattactcatctagtaatcgatgaagctgatgaaatgcttaaaatg
ggttttatcgatcaagtcaaagaggtattgactcatgtaccgatgaacatacaaatgatt
cttttatcagcaacgatgccacaagacattgtcgaattatctaatttacacatggtaaat
ccacaattaatagttgcaaaagattcgatagaaacagaaaataagttgcttcaatattac
tatgaagtagaaaataaggaaaaatcagatttgattagttcagttcttattgtagaaaac
ccaaacagcgcaattatattttgtaacacaaaacagtcggttgacgaggtttaccagatt
ttaaatagaaagtctttttcaccaataaaacttcacggtgatatggatcaaaaagataga
cttaaagtaatcaacgacttcaaacatggtctttatcggtatttggtagcaacagacgtt
gctgctcgtgggcttgatatcgatcaagtttcgctgattataaattttgatctaccacga
aacattgataattacatccataggatcggtagaagtgcaagagctggtgctagtggtaaa
gccatttcatttatcagtaatagagaatacaaatatttagataaaatcacagcacaaaca
aatcaaaaaatagaggaacttaaaattcctactgaattagatgttaaacaagcattagaa
gcttttaataacaaacaagaaaaaacaaaacaaatcaaaatggacaaaggatttgaattc
aagcaagaaattatgaaacttcacatcaatgcaggtaagaaaacgaaaatgagaccatct
gatattgttggagcgatttgtaatataaaagaacttacagcaacagatattggtgttata
accatattagacatctcaacctttgtagaaatactgaataacaaaggtgaaatcgtctat
caagccttgcaaaaaacaccaattaaaggtagaatgcgggttgttagtaaagcaaataaa
acagaatatgaaattgcttatgaagaaacaacgcacacaaaatga
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