Anser brachyrhynchus (Pink-footed goose): 308180221
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Entry
308180221 CDS
T11989
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform 1
KO
K02599
Notch 1
Organism
abrc
Anser brachyrhynchus (Pink-footed goose)
Pathway
abrc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
abrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
308180221 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
Gurken_M
cEGF
Motif
Other DBs
NCBI-GeneID:
308180221
NCBI-ProteinID:
XP_080417566
LinkDB
All DBs
Position
19:complement(3466342..3507416)
Genome browser
AA seq
2548 aa
AA seq
DB search
MKRLLATGLLLALLPAPTRGLRCTQPAESCLNGGKCETFLNGTEVCQCSSAHVGERCQLP
NPCLSSPCKNAGTCTPVVRGSTADYTCACRLGFTDELCLTPRENACLNNPCRNGGTCELV
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYICRCTAGFHGANCKQDVN
ECNISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQTGDTT
YDCTCLPGFAGQNCEENIDDCPGNNCRNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFSGAHCEIDIDECDPDPCHYGTCKDSIAAFTCLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCLCLKGTTGPNCEINLDDCASNPCDYGKCIDKIN
GYECTCEPGYTGRMCNINIDECASNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGRCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGGPCKN
GGECRESEDYESFSCVCPPGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCLCRAGFA
GRNCDTDIDDCQPNPCHNGGSCSDSVGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPAGFTGSYCEH
NINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCAPAFTG
PECQYPASSPCTSNPCYNGGTCEFLSDAPPYYHCNCPANFNGLNCHILDFDFQGGFGQDI
IPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNSKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMSSAVINKVKTSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTRNSQLYPMYVVV
AVLVLLAFIGVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDSDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINCHADVNAVDDLGKSALHWAAAVNN
IEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKP
STKGLSCNGKDAKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQDMAMGNSSRMAFDSVPPRLSHLPVSSPS
TAMSNAPMNFSVGGAAGLNGQCDWLSRLQTGMVQNQYNPLRGNMQPGAHQQTQNLQHGMM
TSLHNGLPTTSLSQMMSYQAMPNTRLASQPHLMQSQQLQQLQQQQLQQPGMQPQQPPQQP
AQPPPQQPQQHHSAGSNASGHIGQNFLGTELSQPDLQPVSGSTMAVHTILPQDSQLLPTS
LPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPHS
NVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggctcctggccaccgggctcctgctggccctgctgcccgccccgacgcgaggt
ttgcgatgcacgcagccggccgagtcctgcctcaacgggggcaagtgcgaaacttttctc
aatgggacggaggtgtgccagtgcagcagcgcccacgtgggcgagcggtgccagctgccc
aacccctgcctgagctccccctgcaaaaacgccggcacctgcaccccggtggtgcgcggc
agcaccgcggactacacctgcgcctgccgcctgggcttcaccgacgagctctgcctgacg
ccccgcgagaacgcctgcctcaacaacccctgccgcaacgggggcacctgtgagctggtg
acgctcagcgagtacaagtgccgctgcccgccgggatggtcaggtaaaacctgccagcag
gccgacccctgcgcctccaacccctgtgccaacgggggccagtgcgtccccttcgaagcc
cactacatctgccgctgcacggccggcttccacggggccaactgcaagcaggacgtgaac
gagtgcaacatctcgccgcccgtctgcaagaacggcgggagctgcaccaacgaggtgggc
acctaccagtgctcctgcaagccggcctacaccggccagaactgcgagcacctctacgtg
ccctgcaacccctcgccctgccagaacggggggacgtgccgccagaccggggacaccacc
tacgactgcacgtgtctgccaggattcgcgggccagaactgcgaggagaacatcgacgac
tgtccagggaacaactgcaggaatgggggcacctgcgtggacggcgtcaacacctacaac
tgccagtgcccccctgagtggacaggccagtactgcaccgaggacgtggacgagtgccag
ctgatgcccaacgcctgccagaacgggggcacctgccacaacaaccacggcggctacaac
tgcgtctgcgtcaacggctggacgggcgaggactgcagcgagaacatcgacgactgcgcc
atggccgcctgcttccagggggccacctgccacgaccgggtggcctccttctactgcgag
tgtccccatggccgcacaggtttgctgtgccacctcgatgacgcctgcatcagcaacccc
tgcaacgagggctccaactgcgacaccaaccccgtcaacggcaaagccatctgcacgtgt
ccttcggggtacatggggccagcctgcaaccaggacgtggacgagtgctcgctgggagcc
aacccatgcgagcacgcagggaaatgcatcaacacccaggggtccttccagtgccagtgt
ctgcagggctactcaggccctcgctgcgagatagatgtcaacgagtgcctctccaacccc
tgccagaacgacgccacctgcctggatcagatcggggagttccagtgcatctgcatgccc
gggtacgagggcgtttactgcgagatcaacacggacgagtgcgccagcagcccctgcctg
cacaacggcaactgcctggataagatcaacgagttccactgcgagtgccccaccggcttc
aacgggcacctgtgccagttcgacatcgacgagtgcgccagcaccccctgcaagaacggg
gccaagtgcgtggacggtcccaacacctacagctgcgagtgcaccgaaggtttctcgggc
gctcactgcgagatcgacatcgacgagtgcgaccctgacccgtgccactacgggacctgc
aaggacagcattgccgccttcacctgcctctgccagcctggctacacgggccaccgctgc
gacatcaacatcaacgagtgccagagccagccctgcaaaaacggggggacctgccaggac
aggaacaacgcctacaactgcctgtgcctcaaggggaccacagggcccaactgcgagatc
aacctggacgactgcgccagcaacccctgcgactatggcaagtgcatcgacaagatcaac
ggctacgagtgcacctgcgagccgggctacacagggcgcatgtgcaacatcaacatcgac
gagtgcgccagcaacccctgccacaacgggggcacctgcaaggacggcatcaacggcttc
acttgcctctgccccgagggtttccacgaccccaagtgcctgtccgaagtgaacgagtgc
aacagcaacccctgcatccacgggagatgccacgatgggctgaacgggtaccggtgcgat
tgcgacccaggctggagcgggacaaactgcgacatcaacaataatgagtgtgaatccaac
ccctgcatgaacggtggcacctgcaaggacatgaccagcggctacatctgcacctgcagg
gaagggttcagcggacccaactgccagaccaatatcaacgagtgtgcttccaacccctgc
ctgaatcagggcacctgcatcgatgacgtggccggctacacctgcaactgcctcctgccc
tacacaggagccacctgcgaggacgtgctggccccctgcgccggcggcccctgcaagaac
ggcggcgagtgccgggagtcggaggactacgagagcttctcctgcgtttgcccgcccggc
tggcaaggtcagacgtgcgagatcgacatcaacgagtgcgtgaagagcccctgccgcaac
ggggccacgtgccagaacaccaacggcagctaccgctgcctctgcagggcgggcttcgcc
ggccgcaactgcgacaccgacatcgacgactgccagcccaatccgtgccacaacggcggc
tcctgctcggacagcgtgggcacattcttctgcgagtgcctggccggcttccgcggcccc
aagtgcgaggaggacatcaacgagtgcgccagcaacccctgcaagaatggggccaactgc
accgactgcgtcaacagctacacctgcacctgcccctccggcttcagtggcatccactgc
gagaacaacactcccgactgcaccgagagctcctgcttcaacggtgggacctgcgtggat
ggcatcaacacgttcacctgcctctgtccggccggcttcacgggcagctactgcgagcac
aacatcaacgagtgcgactccaagccgtgcctcaacgggggcacctgtcaggacagctac
gggacgtacaagtgcacgtgtccccagggatacaccgggctcaactgccagaacctggtg
cgttggtgcgactcctcgccctgcaagaacggggggaagtgctggcagaccaacaacctg
taccgctgcgagtgcaacagcggctggaccgggctctactgcgacgtccccagcgtctcc
tgcgaggtggctgcaaagcagcaaggtatcgacgtcgcacacctctgcaggaactcgggg
ctctgcgtggacaccggcaacactcacttctgccgctgccaggccggctacaccggcagc
tactgcgaggagcaggtagacgagtgctccccaaacccctgccagaacggagccacctgc
acggattacctgggaggctactcctgcgagtgcgtggctggttatcatggagttaactgc
tcggaggagatcaatgagtgcttgtcccacccgtgccagaatggaggaacctgcatcgat
ctcatcaatacctacaaatgctcctgccccagaggaacccaaggggtgcactgtgaaatc
aatgtggatgactgcagccctttctttgatcctgtcaccctggggcccaagtgctttaac
aatggcaagtgcacggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagacgtcaacgagtgcctgtccaacccctgcgacgcgcgcggc
acccagaactgcgtgcagcgggtcaatgactacaaatgcgagtgccggcctggctacgca
gggcgtcgctgcgacaccgtggtggacggctgcaagggcaagccctgcaggaatggggga
acgtgcgctgtggccagcaacaccggccgcggcttcatctgcaagtgccccccgggcttc
gtgggtgccacctgtgagaacgactcccgcacctgcgggaacttgcactgcctgaacggc
ggcacctgcatctccatccacaagagctccaagtgcatgtgcgccccggccttcacgggg
cccgagtgccagtacccggccagcagcccctgcacctccaacccctgctacaacgggggc
acctgcgagttcctcagcgacgctcccccctattaccactgcaactgccctgccaacttc
aacggcctcaactgccacatcctcgacttcgatttccaaggcgggttcgggcaggacatc
atcccacccaaaattgaggagaagtgcgagatcgcggtttgcgccgggtatgccggcaac
aagatctgcgacggcaagtgcaacaaccacgcctgcggctgggacgggggcgactgctcc
ctcaacttcaacgacccctggaagaactgctcgcagtcgctgcagtgctggaagtacttc
aacgacggcaagtgcgactctcagtgcaataacgcgggctgcctgtacgatgggttcgac
tgccagaagtacgaagggcagtgcaaccctctgtatgatcagtactgcaaggaccacttc
tcagatggtcactgtgaccagggctgcaataattttgagtgcgaatgggatggtctggac
tgtgcaaacaatatgccggagaagcttgcagacggcaccctggtggtggtggtgctgatc
acccccgagaacctgaagaacaactccttcaatttcctgcgggagctgagccgcgtgctg
cacaccaacgtcgtcttcaagaagaactccaagggagagtatatgatcttcccctactat
ggcaacgaggaggagctgaaaaagcattacatcaagaggtcaacagaggactggtcggat
atgtccagtgctgtcatcaacaaagtaaagaccagcctctactcccgggctggcaggagg
caaaagagagagctcgatcagatggacatcagaggatccatcgtctacttggaaattgat
aaccgtcagtgcatccagtcgtcttcccagtgcttccagagtgcaaccgacgtggcggcg
ttcctgggtgccttggcctcccttggcaacctgaacataccctacaaaatagaagccgtt
aaaagtgaaacggctgaacccacgaggaactcccagctgtatcctatgtacgtggtggta
gctgtgctggtcctgcttgctttcatcggagtgggagtactggtatctcgtaagcggcgc
agggagcatgggcagctttggttcccagagggcttcaaagtgacagagtcaagcaagaag
aagcgacgagagccgcttggggaggattctgttggactgaaacccctcaaaaacgcttca
gatggcacactgatggatgacaaccaaaatgagtggggtgatgaggagaccttggacacc
aagaagttcaggtttgaggagcaggcgatgctgcccgattcagatgatcagacggaccac
aggcagtggacccaacagcacctggatgccgccgacctccgcatatcctccatggcacct
actccaccgcagggtgaaatcgatgcagactgcatggatgtcaacgtgagaggtcccgat
ggcttcacccccctcatgatcgcctcgtgcagcggaggtgggctggagactggcaacagc
gaagaggaggacgatgcccccgccgtcatctcggacttcatttaccaaggcgccagcctg
cacaaccagactgaccgcacgggcgagaccgcgctgcacctggccgcccgctactcccgc
tccgacgctgccaagcgcctgctggaagccagcgccgacgcgaacatccaggataacatg
ggcaggactcctctccacgcggccgtctccgccgacgcccaaggagtcttccagatcctt
atcaggaacagggcaaccgatctggacgcccgcatgcacgacgggaccacccctctgatc
ctggctgctcgcctggctgtggagggcatgctggaggatctcatcaactgccacgcagac
gtcaacgccgtggatgatctaggcaagtcagcactgcactgggcagcggccgtgaataac
attgaagctgcagtcgtccttctgaagaacggtgccaacaaggacatgcagaacaataag
gaggagaccccgctgttcctcgcggccagagaggggagctacgaaacggccaaagtcctc
ctggaccattttgcgaaccgcgacatcacggaccacatggaccggctcccgcgggacatc
gcgcaggagcgcatgcaccacgacatcgtgaggctgctggacgagtacaacctggtgcgg
agcccgccgctgcacaacggccctctgggggcacccacgctgtccccgccgctctgctcc
cccaacagctacatcggcaacctgaaacccgccgtccagggcaagaaggccaggaagccg
agtaccaagggcctgagctgcaacggcaaggatgccaaagacctgaaagcccggaggaaa
aagtcacaagatggaaaaggctgtctgcttgacaactccagcgtgctgtccccagtggac
tccctggagtcgccccacgggtacctgtcagatgtcgcctctcctccgctgatgacctct
ccgtttcagcagtccccttccatgcctctgaatcacctgccgggcatgcccgatgcccac
atgagcatcaaccacctcaacatggcggggaagcaggatatggccatgggaaactccagc
aggatggccttcgattcggtgccgccacgtctctcgcacctccccgtctccagccccagc
acagccatgagcaacgccccgatgaatttctccgtcggcggagccgccggcctgaacggg
cagtgcgactggctgagcaggctgcagacgggcatggtgcagaatcagtacaaccccctg
aggggcaacatgcagccgggggcgcaccagcagacgcagaacctgcagcacggcatgatg
acctccctgcacaacggcttgcccaccaccagcttgtcgcagatgatgagctaccaggcc
atgcccaacacccggctggcctcccagcctcacctgatgcagagccagcagctgcagcag
ctccagcagcagcagctgcagcagcccggcatgcagccgcagcagcccccgcagcaaccc
gcgcagccgccgccgcagcagccgcagcagcaccacagcgccggctccaacgccagcggc
cacatcggccaaaatttcctcggtaccgagctgagccagcccgacctgcagccggtgagc
ggcagcaccatggcggtgcacaccatcctgccgcaagattcgcagctgctgcccacgtcc
ctgccgtcctccctcgcgcagcccatgaccaccacgcagtttctaacgccgccctcccag
cacagttattcctcccccttggacaacacccccagccaccagctccaggtgcccgaccac
cccttcctaacgccgtctccggagtcgccggaccagtggtcgagctcgtctcctcactcc
aacgtgtccgactggtccgagggcatctccagccccccgaccagcatgcagtcgcagatg
ggacacatccccgaagccttcaagtga
DBGET
integrated database retrieval system
