Anser brachyrhynchus (Pink-footed goose): 308180938
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Entry
308180938 CDS
T11989
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50 isoform 1
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
abrc Anser brachyrhynchus (Pink-footed goose)
Brite
KEGG Orthology (KO) [BR:
abrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
abrc04121
]
308180938 (TRIM50)
Ubiquitin system [BR:
abrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
308180938 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
PRY
zf-C3HC4
TRIM_CC
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-Nse
zf-RING_4
U-box
Sina_RING
zf-ANAPC11
Rep_trans
CCDC89
TRAF3_RING
CRLF3_N
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
308180938
NCBI-ProteinID:
XP_080419512
LinkDB
All DBs
Position
20:complement(12017945..12024399)
Genome browser
AA seq
501 aa
AA seq
DB search
MLKGGSMARRMSIDELEDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSGELDGQFLCP
VCRQTVDCSASPPNVTLARVIEALQSRGEAEPTPESCPTHHNPLSLFCETDQEVICGLCG
TIGNHRQHKITPISTTYCRMKEELSVLLTDVHRYKRNLDEHFSKLINNKIRIANEADVFK
WVIRKEFQELHRYIDEEKATFLESVEGKEAQLITSIESQVKQTSDALQRLKEIHSSLETL
GNESQLDFIRKYSSSQFRSELPSLLPGDGIFSPISFKPCFHQDDIKMTVWKRLHRHVLPA
PEMLKLDPVTAHPLLELFKGDTVVQCGLYQRRDSNPKRFDSSNCILTCKGFSCGQHYWEV
IVGTRNHWRVGIIKGTVSRKGKLSKSPENGVWLIGLKEGKVYEAFSTPRATLPLTARPQR
IGIYLHYERGELTFYNADSPDELSPIYTFQAEFQGQLYPIVDLCWPERGPYSPPIILPPP
GAPRRPQGPCRQPAPEAPAKP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaggtggcagcatggctcggaggatgagcatcgatgagctggaagaccagctc
ctctgtcccatctgcctggaggtcttcaaggagcccttgatgctgcagtgcgggcattct
tactgcaagtcgtgcgtggtgtcactgtctggagagctggacgggcagttcctgtgcccc
gtgtgccgtcaaaccgtggactgcagtgcctcaccacccaacgtcacactggcccgtgtc
attgaggcactgcagagccggggcgaggcagagcccaccccagagtcctgcccaacacac
cacaaccccctcagcctcttctgcgagactgaccaagaggtgatctgtgggctgtgtggc
accatcggcaaccaccgccagcacaagatcacccccatctctaccacgtactgccggatg
aaggaggagctgtctgtgctgttaaccgatgtccaccggtacaagagaaacctggatgaa
cacttcagcaagctcatcaacaacaaaatccgcattgcaaacgaggcggatgtcttcaag
tgggtgatccggaaggagttccaggagctgcacagatacattgatgaggagaaggccacc
ttcctggagagcgttgaggggaaggaagcccagctcataacctccatcgagtcccaggtc
aagcagacatcagacgccctgcagaggctgaaggagatacatagctctctggagacgctc
ggcaatgaaagccagcttgatttcatccgtaaatacagctcctcccagttcaggtcagag
cttcccagcctgctcccaggtgatggcatctttagccccatttccttcaagccgtgtttc
caccaagatgatatcaagatgaccgtttggaagcggctgcaccgccacgtcctgccagct
ccagagatgctgaaactggacccggtgacagcgcatcccctcctggaactcttcaagggt
gacacagtggtgcagtgtgggctctaccagcgccgggacagcaaccccaagcgttttgac
tccagcaactgcatcctcacctgcaagggcttctcctgcggccagcactactgggaggtg
atagtgggcacccgcaaccactggcgcgtgggcatcatcaagggcacggtcagccgcaaa
gggaagctcagcaagtctcccgagaacggcgtgtggctcatcggcctaaaggaaggcaaa
gtctacgaggccttcagcaccccgcgggccaccctgccgctgaccgcccggccgcagcgc
atcgggatctacctgcactacgagaggggcgagctgaccttctacaacgccgacagcccc
gacgagctcagccccatctacaccttccaggcggagttccagggccagctctaccccatc
gtggacctgtgctggccggagcgggggccctactcgccccccatcatcctgccccccccc
ggcgccccccggcgcccccaggggccgtgccgccagccggcccccgaggcgcccgccaag
ccctag
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