Anser brachyrhynchus (Pink-footed goose): 308185508
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Entry
308185508 CDS
T11989
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3 isoform 1
KO
K12600
superkiller protein 3
Organism
abrc Anser brachyrhynchus (Pink-footed goose)
Pathway
abrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
308185508 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abrc03019
]
308185508 (SKIC3)
Messenger RNA biogenesis [BR:
abrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
308185508 (SKIC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_16
TPR_12
TPR_8
TPR_17
TPR_CcmH_CycH
CFAP70_TPR_C
TPR_11
CFAP70_mid_TPR
ANAPC3
TPR_9
TPR_15
ARM_TT21_C
CABIN1_N
TPR_INTS8_3
TTC22_N
Fis1_TPR_C
TPR-S
BTAD
MSC6_N
DUF8323
ARM_TT21
TolB_N
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
308185508
NCBI-ProteinID:
XP_080429837
LinkDB
All DBs
Position
Z:complement(78345476..78394398)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSNQTDVKGDLADVYKKLLELYGSGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLITMKQEEGAEKAELHQLWKRMIQLLADSAQSQDNKTLQ
MLLNAFEEAVNSADPVPSEDHQNLYKDFIQCLSKFPHETTKLEKACDDMMALYPTVSYPL
EVLCLHFIESGVVSEEALHHFSKLLEMDSSSGPGIVGFGIKCLQEKKYEEAVKSLTEGLK
KASQCLGAWHYLAEAQMKIHKHRNAVLSCNQALKNLGNPESPTLQQKKDRILQLKAEALI
KIGDADAAEEAINALEQIVGASSDPVVLAFRGRAYLNKGLVDQASKISQELLLSHPDLAE
AHALEGFIHYSQKKYEQAERSFQNAIERRAGTAEYHQYLGLTYWFMSDETKKDKGKTLTH
FLKAAKLDSYLGSVFCYLGNYYRDIAEDKNRARGCYKKAFELDGTDEESGTAAVDLSVEL
GDMDTALSILNEVTEKANAGTVKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCW
ESLGEAYFGRGSYATALKAFKKASELNPELVYSIYRAAAVEQILGKHENAIATYQEILKK
TEEYVPALKGLGECYLMLAKSALDKYLDRKAVDYIEQALEFFTRATKHRPDISSLWKLLG
DTCTSVHVISPAKVNVQVLGLLLGKNEGKQMLKKNELLRLGGRCYGRALKLMPLPNIWCD
LGINYYRQAEHLTAVDADMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIG
NYALAQHSFIKSVQAEQINVVAWTNLGVLYLVTGNIEQAHEAFKVAQSLEPSYLLCWIGQ
ALIAETVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKDNRNTEVYLYNIVQMNA
IPAAQVVMTKYTERNPDDASAFTMLGYLSEYMDLKRQAKDAYERAASLLKNSEDTEKYNI
AMQNYGRSLCAIGECDKAIEVYTSIPLTDFDGIVGIALAYFKKGLLQESIKAYEKALSVA
ESEQDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSTESLKVLCTLGLVKQDVTLAT
AALKELLKHEKGKDGIYERCLIASGVYALQGRNVAVQREVSKAIHSNPDNPALWSLLSRL
VPLYTLQKSKGGAMAGNIAHALDSSYGKEVLLNVAVNQLAAGCHMLKDQRENPLKNIQKA
IHLCPDNPAAWAVLMAACHAENTVVCLNNTQPKRTGLEMTLVSTISAKTRENNLPRNYIQ
TLEDWSLCQAITSLEETGRISEAEALCTKGLKSCPEHPGLFLLLRQVQCRQLLQTHKELP
DTILEELRKTVMTSSSVAAWQWLAKVYQSQGMMVGAEMCYRKSLQLASQQGSWSGKLSSL
LRLAMLALEICMANVPNEHWPSLVQEATTEALKLSPCPLASLLQALLQYNRKMGARETRR
MLERVVYQPGNPESIVSVARWYLLQHLYAKDDYELIDVLVENAKANGDVRALELNKKLSS
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaagcagcattaaagagtgctagagaagccataagaaataaa
gaatataaggaagccttaaaacattgcaaggcagtcttaaagcaagaaaaaaataactac
aatgcctgggtatttattggcctggcagctgctgagctagaacagcctgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccaaaccagctgctggcgtggcagggatta
gcaaatttatatgagaaatccaaccaaacagatgtcaaaggagacttagcagatgtttat
aaaaagctcttggaactctatggaagtggagacaagcagaaatggtgtgatgtatgtaac
aagcttgtggaactatatcatcaagaaaagaaatatttagaggtggctgaaacgtggcag
aaactaataactatgaaacaggaggaaggtgcagaaaaagcagagcttcatcagctttgg
aaaaggatgatccagttactggcagacagtgcacagagccaggacaataagactctgcaa
atgcttttgaatgcatttgaggaggcagtgaactctgctgaccctgttcccagtgaagac
caccaaaatctttacaaagactttattcagtgcctgtcaaagtttcctcatgaaacaacg
aagttggaaaaggcctgtgatgacatgatggctttatatcctactgtgagctatcctttg
gaagtactttgcttgcactttattgagtcaggtgtcgtgtcagaagaggccctgcaccat
ttttctaagcttttggagatggactcaagtagtggtccaggcatcgttggttttggtata
aaatgcctccaagaaaagaaatacgaggaggctgttaagagtcttactgaaggtttgaag
aaggcgagccagtgtctgggagcatggcattatttggcagaggcacagatgaaaattcac
aagcacaggaatgctgtcctgtcctgtaatcaagctctcaagaatcttggaaatcctgag
agtcctactcttcagcagaagaaggaccgtattcttcagttgaaagcagaggctttgatt
aaaataggtgatgccgatgctgcagaagaagccattaatgcacttgagcagattgtgggt
gcaagcagcgatccagtggttttagctttcagaggtcgggcgtatctaaacaaaggttta
gtggatcaagcttcaaagatttcacaagagcttctgttgtcacaccctgatctggctgag
gcccatgctcttgagggtttcatccattattctcaaaagaagtatgaacaggcagaaagg
agttttcaaaacgccattgaaagaagggctggaactgcagagtatcatcagtacctgggg
ctcacctattggttcatgagtgatgagacaaaaaaagacaaaggaaaaacactcactcac
ttcttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaac
tactacagagacattgctgaagacaaaaatagagctcgtggttgctataaaaaggctttt
gaactggatggaactgatgaagagtctggaacagcagctgtagacttaagtgtggaactt
ggagacatggataccgctctgtcaatcttgaatgaagtaactgaaaaagcaaatgctggt
acagtaaaatgggcctggctgcatcgtggactttactacctcagaactgggcagccgtca
caagcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgg
gagtctctaggggaggcttactttggcagaggtagctatgcaacagctctaaaagccttc
aagaaggccagtgaactgaacccagagcttgtatacagcatttacagagctgcagcagtt
gagcagattctaggcaaacatgaaaatgctatagctacctatcaagaaatcttaaagaag
actgaagagtatgtgcctgcattgaaaggacttggtgagtgctatctcatgctggcgaaa
tcagcccttgataagtatcttgataggaaggctgtggattacatagagcaggctcttgaa
ttttttacaagggcaacaaagcaccgtcctgatatatcttccctttggaaactgcttgga
gatacctgtactagtgtgcatgttatttcaccagccaaagtgaatgttcaagttctagga
ttgcttctgggtaaaaacgaaggcaaacagatgctgaagaaaaatgagctgctcagactg
ggaggaaggtgttacggcagagctttaaaattgatgcctttgcctaacatatggtgtgat
cttggaataaattattatcgacaagcagagcacctcacagcagtggatgctgacatgaat
gagatcagtgaactgctagagaaatctttgcagtgtctcaaaaaagctgtgaggcttgac
agcaaaaatcatctttattggaatgcacttggtgtagttgcttcctgtagtgctattggg
aattatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgtt
gttgcctggaccaacttgggggttttgtatctagtgactggaaacattgagcaagctcat
gaagccttcaaggtagcccagtctctggagccctcttacctactgtgttggattgggcag
gctcttatcgcagaaacggttggcagctatgatactatggatctcttcaggcatacaact
gaacttagtatgcatactgagggagcaaaaggctatgcccactgggtttgttcaacgctg
caagataaagacaacagaaatactgaggtgtatctgtacaacattgttcaaatgaatgct
attccagcagctcaggtggtcatgaccaaatatacagaaagaaatccagatgatgcatct
gctttcacaatgcttggttacttgagtgagtatatggatctaaaaaggcaggcaaaagat
gcttatgagagggccgcttcattactgaaaaactctgaggatactgagaaatataatata
gctatgcaaaactatggcagatcactgtgtgccattggtgaatgtgataaagccattgag
gtttatacatcaatacctctaactgattttgatggcattgtggggatagcattagcctac
ttcaagaaaggactcttacaagaaagtattaaagcctatgagaaagcgttgtctgttgcc
gagtctgaacaagataaagcacatatcctgactgccttggcaataatagagtataagcag
aacaaagtggatgctgcaaagaccctactgtttaaatgctcattaaaggaacctagtacg
gaaagtctgaaggttttgtgcacgctaggactggtaaagcaggacgttacacttgcgaca
gcagccttaaaagaattactgaagcacgagaaaggaaaagatgggatttatgagaggtgc
cttattgcatctggtgtttatgcattacaaggtagaaatgtggcagtccagagagaagtc
tcaaaagcaatacatagtaaccctgataatcccgctctttggtctcttttgtctcgacta
gttccactgtatacgttacagaagtcaaaaggtggagccatggcaggaaacattgcacat
gcacttgattcaagctatgggaaggaagtcctactaaatgttgcagttaatcagctggca
gcaggatgtcacatgttaaaagatcagagggaaaatcctctgaaaaatattcagaaggca
atccacctctgtccagataaccctgctgcatgggcagtgctaatggcagcctgtcatgct
gagaacactgttgtctgtctaaacaacactcagccaaagcgaacaggtctagagatgaca
cttgtatctacaatttcagccaaaactagagaaaataaccttccacgtaattatatccag
actcttgaagattggtctctatgtcaagctatcaccagtctagaggagactggtagaatc
tcagaagctgaagcactttgtaccaagggtttaaagagctgtcctgagcacccgggtcta
tttttgcttttgagacaagttcagtgtaggcagctgttgcagactcacaaagagcttcca
gataccatcctggaggagcttcgcaaaacagtcatgaccagttcttcagttgcagcctgg
caatggctggcaaaagtatatcagtcccaaggaatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcgtcacagcagggcagctggagtgggaagttatccagtctg
ctcaggctggctatgctagcactggaaatctgcatggctaatgtcccaaatgagcattgg
ccatccttggttcaagaggcaacaactgaagctttgaaactctcaccctgccccttggca
tctctcctgcaagcactactgcagtataaccgcaaaatgggagcaagggagactcgtcga
atgttggaaagagtggtctaccaaccagggaatccagaatccatagtgtcagtggcacgc
tggtacctcctgcagcatctgtatgccaaagatgattatgaattaatagatgtacttgta
gaaaatgccaaagctaatggagatgttagagctctggaactaaacaagaaattgtcatca
agtgcctag
DBGET
integrated database retrieval system
