Anser brachyrhynchus (Pink-footed goose): 308190032
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Entry
308190032 CDS
T11989
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform 2
KO
K14327
regulator of nonsense transcripts 2
Organism
abrc Anser brachyrhynchus (Pink-footed goose)
Pathway
abrc03013
Nucleocytoplasmic transport
abrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abrc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
308190032 (UPF2)
03015 mRNA surveillance pathway
308190032 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abrc03019
]
308190032 (UPF2)
Messenger RNA biogenesis [BR:
abrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
308190032 (UPF2)
mRNA cycle factors
P-body specific factors
308190032 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
308190032
NCBI-ProteinID:
XP_080436981
LinkDB
All DBs
Position
1:complement(<6638301..6701336)
Genome browser
AA seq
1292 aa
AA seq
DB search
MPAERKKSASMDEKESSLNNKEKEFGERRPVSTREKPKEDVKVGVKRETLKVPEDKKKKL
EEDKRKKEDKERKKKDDDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEVKRQQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADILD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQSKDSSKDESRDSKDAKDNKDAPGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQGKREGADSTGADSSDGKQAERKQEDEEASTGSHLKLIVDAFLQQLPNCVN
RDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDL
CSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHI
EMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPA
EKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVK
YNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYN
YRMVESAVIFRTLYSFTSFGVNPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKR
KLDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQV
QDLEREFLIKLGLVNDKDSKDSITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEG
SDNEEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKM
MLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGSGEGESESGDTMPFVMLTRKGNK
QQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPA
PANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagtcagcaagcatggatgagaaagaatcttcgttaaataat
aaagaaaaagaatttggtgaaaggcgaccagtgagcaccagggagaagccaaaagaagat
gtcaaggttggcgtgaagagagagactttaaaggttcccgaagacaaaaagaaaaaactg
gaagaggataaaagaaaaaaagaagacaaggagcggaagaagaaagatgatgataaagtg
aaggcagaagaagagcaaaagaagaaagaagaggaagaaaaaaagaaacttgaagaggaa
gagaaaaagaagcaagaggaggaagtgaaacgtcagcaagaagaagcagctgctcagctg
aaagaaaaagaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaaga
aaagagcttcgcagcaaaaaccagaatgcaccagacaatcgccccgaggaaaacttcttc
agcagactagactccagtctgaagaagaacacagcttttgttaagaagctaaaaaccatt
acagagcaacaaagggactccttgtcccatgattttaacagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaagccaaactgaaaatctcggatgtgaactgc
gctgtgcacttgtgttccctcttccaccagcgctatgctgattttgctccctcgttactt
caggcttggaaaaaacattttgaagcaaggaaagaagagaagactcccaacattactaag
ttgagaactgatctgcgtttcattgcagagttgacaatagttgggattttcactgacaag
gaaggtttgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagagtcc
cacactcatgtttctgtggttatcagcttttgtcggcactgtggagatgacattgctggt
ttggtaccgaggaaagtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacagaatattgaaagacaaaac
aggcgcatccttcactccaaaggagaactgagtgaagatcggcacaagcagtatgaggaa
tttgcgatgtcatatcagaagctgttggccaattctcagtctctagccgatattctggat
gaaaatatgcctgaccttccccaagacaaaccaacacctgaggaacatggacccggtatt
gacattttcacaccaggaaagcctggagaatatgacctggaagggggtatttgggaagat
gaagatgctagaaacttctatgagaacctcatcgacttgaaggcttttgtgcctgcaatc
ttgtttaaagataatgaaaaatgttcccagagcaaggattccagcaaggacgaatcaaga
gattccaaagatgccaaagataataaggatgcacctgggagtgaggatttggaattggag
ctggagaacttggatattaatgatgatcccctggaattagactgtggagatgaggcggaa
gatcttactaaaaagcttcttgatgaacaaggcaagagagagggagcagatagcaccgga
gctgacagtagtgacggaaaacaagctgaaagaaaacaagaagatgaagaagccagtact
ggatctcatttaaaacttatagtagatgcttttcttcagcagcttccaaactgtgtcaac
agagacctcatagacaaggcagccatggatttttgcatgaatatgaatacaaaagccaac
agaagaaaactagtgcgagcccttttcatagttcctaggcaaaggttggatttgctaccg
ttctatgcaaggctggttgccacgttgcatccctgtatgtcagatgtagcagaggatctt
tgttccatgctgaaaggggatttcagatttcatgtaagaaaaaaggatcagatcaacatt
gaaacaaagaataaaactgtgagatttattggtgagcttaccaagtttaagatgttctcc
aaaaatgatactctccactgtttaaagatgctcctgtcagacttctctcatcaccacatt
gagatggcatgtactctgttggaaacctgtggcagattcctctttaggtcaccagaatct
cacttgagaaccagcgttcttttggaacaaatgatgagaaagaaacaagcaatgcatctt
gatgcccgctatgttacaatggtggaaaatgcctactactactgtaatccccctccagct
gaaaaaactgtgaagaaaaaacgtcctcccttgcaggaatatattcgtaagcttctctac
aaggatctctcaaaggtcaccacagaaaaggtcctgagacagatgcgcaagctgccttgg
caggatgctgaagtaaaagattatgttatatgctgcatgatcaacatctggaatgtgaaa
tataatagtattcactgtgtagccaacctcctagcggggttggtcctttaccaggaggat
gttggaattcatgttgtggatggagtactagaggatattcgactaggaatggaggttaac
cagccaaagtttaaccagcggcggatcagcagtgccaagtttttgggggagctttacaat
tatcgaatggtggaatcggctgtaatatttcgaactctgtattcattcacatcatttggt
gtgaaccctgatggtagtcctagtccactggatcccccagagcatcttttcagaatcaga
ctagtctgtacgatccttgatacctgcgggcagtatttcgacagaggatccagcaaacga
aaacttgattgcttccttgtatacttccagcggtatgtttggtggaaaaaaagtctggat
gtctggacaaaagaccacccgtttcctatagacattgactatatgatcagtgatacactg
gaactcctgagaccaaagataaagctctgcaattctctggaagaagctatcagacaggtt
caagacttggaaagagaattcttaataaaattagggcttgtgaatgacaaagattccaaa
gattccattacagaaggagagaatctggaagaggatgaagaagaagaagaaggtggagca
gagacagaggaacaatccggaaatgaaagcgaagtaaatgagccagaagaagaggagggt
tctgacaatgaggaagaagaaggtgaagaagaagaagaagaaaacactgattatcttaca
gactccaataaggaaaatgaaactgatgaggagaatacagaagtaatgattaaaggagga
ggacttaaacatgtcccttgtgcagaagatgaggacttcattcaggcattggataaaatg
atgctagaaaatcttcagcaacggagtggcgaatcagttaaagtacatcagttggatgtg
gctattcccctgcatctcaaaagtcagctgaagaagggtcccccgcttggaagtggagaa
ggggagtcagagtctggagacacaatgccatttgtcatgttaacacgaaaaggcaacaaa
cagcagtttaagattttaaatgtaccgatgtcttcccaacttgctgcaaaccactggaac
caacagcaggctgaacaggaggagagaatgcggatgaaaaagctcactttggatatcaat
gagcggcaagaacaagaggactaccaggaaatgttgcagtctctggcacagcgtcccgct
ccagcaaatacaaatcgcgagcggcgtcctcgttaccagcatccgaagggagcacctaat
gcagatctaatctttaaaactggtgggaggagacgttga
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integrated database retrieval system
