Anser brachyrhynchus (Pink-footed goose): 308192174
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Entry
308192174 CDS
T11989
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
abrc Anser brachyrhynchus (Pink-footed goose)
Pathway
abrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
308192174 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abrc03021
]
308192174 (CPSF3)
03019 Messenger RNA biogenesis [BR:
abrc03019
]
308192174 (CPSF3)
Transcription machinery [BR:
abrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
308192174 (CPSF3)
Messenger RNA biogenesis [BR:
abrc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
308192174 (CPSF3)
U7-dependent histone pre-mRNA processing factors
308192174 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
308192174
NCBI-ProteinID:
XP_080441583
LinkDB
All DBs
Position
3:110128589..110148645
Genome browser
AA seq
691 aa
AA seq
DB search
MSAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVQKISKKVDMDVYSKRMEIMLQDMFGEDCVSSKDGSVLCVTVDGKTANVSLDTRTV
DCEPGSEDDDSLREMVELAAQRLYDALSPVH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaagcggaaagccgaggccctgatcccggcggaggagagcgaccagctgctc
atccggcccctaggtgctggccaagaagtaggaagatcatgcattattctggaatttaaa
ggaagaaaaataatgcttgattgtggcatccatcctggactggaaggaatggatgctctt
ccttacattgatttgatagaccctgctgagatagatctcctcctaataagtcatttccat
ttagatcactgtggagctttaccatggtttttgcagaaaacaagttttaaaggaaggaca
tttatgactcatgccacaaaagctatttacagatggcttctttcagactatgtcaaagtc
agtaatatatcagcggacgacatgctatatacagaaacagaccttgaagaaagcatggac
aagattgagaccatcaacttccatgaagtgaaagaagtggcaggaatcaaattctggtgc
taccacgcaggccacgttctgggagcagccatgtttatgattgaaatagctggtgtgaag
cttttgtatacaggtgatttctcaagacaggaagacagacatctgatggcagctgagatt
cccaatattaagccagatattcttataattgagtccacctatggtactcatattcatgag
aaaagggaagagcgagaggcaagattctgcaatactgttcatgacattgtaaatagagga
ggtagaggtcttattcctgtgtttgccctgggtcgagcgcaagaactacttctaatttta
gatgaatactggcaaaatcacccagaactccacgatatccctatttactatgcctcctct
ttggcgaagaagtgcatggcagtttatcagacatatgtcaatgccatgaatgacaaaatc
cgcaagcaaatcaacatcaacaatccatttgttttcaagcatattagtaacctgaagagt
atggatcattttgatgatatcggcccgagtgtggtgatggcttccccaggtatgatgcag
agtggcttatccagagagctgtttgagagctggtgcacagataagaggaatggagtaatt
atagccgggtactgtgttgaaggaacacttgctaagcacatcatgtctgaacctgaagag
atcacaactatgtcagggcaaaaactccccctgaagatgtctgtggattacatttctttc
tctgctcacacagattatcaacaaactagtgagtttatccgggccctgaaacctccacat
gtgattttagttcatggcgagcagaatgaaatggccaggttgaaagcagcattgatacga
gaatatgaggataacgatgaagttcacatagaagttcataatcctaggaataccgaagct
gtgacattaaacttcagaggagaaaaacttgccaaggtgatgggatctttagcagataag
aagccagaacaaggacagagaatttctggaatcctagttaaaagaaattttaactatcat
atcctttctccatgtgacctctccaactatacggacttggctatgagcactgtaacacag
acacaagctattccatataccggccctttcaatctcctttattaccagctacaaaagctt
actggtgacgtagaagaaatagaaatccaacaaaaaccagccctgaaggttttcaaaaat
attaccgtgatccaagaaccaggcatggtagtccttgagtgggtggcaaatcctgctaat
gatatgtatgcagacaccgtgacaacagtgatactggaagttcagtcaaatcctaaaata
cagaaagctgcagtgcaaaaaatttccaaaaaagtagatatggatgtgtacagcaagaga
atggaaatcatgcttcaggatatgtttggagaagactgtgtaagttcaaaagatggctct
gttctgtgtgtcacagtagatggaaagactgcaaacgtctctctggacactcggacagtt
gactgtgagccaggaagcgaagatgatgactcccttcgtgaaatggtggaactcgctgcg
cagaggctctatgatgccctcagcccagtacactga
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