Anser brachyrhynchus (Pink-footed goose): 308194649
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Entry
308194649 CDS
T11989
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform 1
KO
K10754
replication factor C subunit 1
Organism
abrc Anser brachyrhynchus (Pink-footed goose)
Pathway
abrc03030
DNA replication
abrc03410
Base excision repair
abrc03420
Nucleotide excision repair
abrc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
308194649 (RFC1)
03410 Base excision repair
308194649 (RFC1)
03420 Nucleotide excision repair
308194649 (RFC1)
03430 Mismatch repair
308194649 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abrc03032
]
308194649 (RFC1)
03400 DNA repair and recombination proteins [BR:
abrc03400
]
308194649 (RFC1)
DNA replication proteins [BR:
abrc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
308194649 (RFC1)
DNA repair and recombination proteins [BR:
abrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
308194649 (RFC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
AAA_22
Rad17
BRCT_2
AAA_30
AAA_5
AAA_16
RNA_helicase
AAA_17
RuvB_N
TIP49
nSTAND3
AAA_33
AAA_18
AAA_7
Zeta_toxin
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
308194649
NCBI-ProteinID:
XP_080446924
LinkDB
All DBs
Position
4:55200722..55245004
Genome browser
AA seq
1238 aa
AA seq
DB search
MVPGDVVLWATVAVGGWLDAKISDPFSTLTPPALAPGAEPCRRPAPRACDDSGARRGGGS
WREALRGSGVRGGGGGGHGAGGVPLRRQRAASSMDIRKFFGVVTPGKRQECENVKKSDKI
KNGEGDSSGKKRGKETKVKNSPSEDVPKQKQTYKKKRIIYDSDSEEEVQSVKKSKKPSEK
KAATPKLGKVLKQHPVVYVSETDEDDDFVNKRISLKPKENGASAISCPGTTTVKKEDVKP
RAKPKPLSPVKLTPTSALDFFGTSSVQRSEKKLVASKRKEPSQSRDSTVDDEAIARQLQL
EEDSELERQLHEDEEFARTLAMLDETPQKKKARRDSEEQAVLSFKSSPNVTDRYKQSQRV
KATNSAGEAKQPKSENSKGSHLPPRSTDGKLAEESTDKTLPLKPTSKLVALKRKEESAEK
ERGTQSSVSKEKLQGKEEKKTPKKEKISPKKAESVSPEDSEKKRNNYQAYRSFLNREGPK
ALGSKEIPQGAENCLEGLTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGR
DCGQSKCEKASALGTKIIDEDGLFDLVRTMPGKKSKYELAAESEAKKTESRHKKTPQKTE
TGKKNFSPLKREADIKKRNSTPEKGGTFKSVKKETAAARKLADFKQQTAEKKEVPEPKGT
LVSEINENGTERLLWVDKYKPTSLKAIIGQQGEQSCANKLLRWLRNWHKNTSEDGQAKAS
KLGGKDDGISSKAALLSGPPGVGKTTTAALVCKELGYSYVELNASDTRSKNSLKEVVAES
LNNTSIKDFCSGTSSSVSGKHVLIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCND
RNHPKIRSLVHYCFDLRFQRPRLEQIKGAMMSIAFKEGLKIPPPAMHEIILAANQDIRQV
LHNLNMWCAKDKSLTYDEAKTDASRAKKDIKLGPFDVVRKVFAAGEEASRMSLIDKSDLF
FHDYSLAPLFVQENYVHVKPAAAGGDLKKHLMLLSRAADSICDGDLVDKQIRTKQNWNLL
PTQAIYSSVLPGELMRGYMSQFPVFPSWLGKFSSTGKHERIVQELAMHMSLRTQMCKRTV
NMEYLSYLRDALVQPLKDFGADGVQQAITFMDSYCLMKEDVENIMEISMWGGKPSPFSKL
DPKVKAAFTRAYNKEAHLTPYSLNSVKTSKRQSGSVATSELSEDLNVDEIQSDEDEQDSV
ESDAMIKQKKAKSSKLPKREKNEEPTKKEGKRKEKTRH
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctggggacgtggttttgtgggcgacagtggcggtaggggggtggttggacgcg
aagatctcggatcccttctccaccctaacgcccccagcgttagcgcccggggccgagccc
tgccgccgccccgcccctcgcgcctgtgacgacagcggcgcgcgccgcggtggcgggagt
tggcgcgaagctttgcggggttccggggttagggggggcggtggcggcggccatggagcc
ggaggcgtcccgctgaggaggcagcgcgccgccagcagcatggatatccggaaattcttt
ggtgttgtaacccctgggaagcgacaagaatgcgagaatgtgaaaaagagtgacaaaata
aaaaatggggaaggagactcgagtgggaaaaagaggggaaaagagactaaggtgaagaat
tcccccagtgaagatgttcccaaacaaaagcagacatacaagaaaaaaagaatcatctat
gattcagattcagaagaggaggtgcagtcagtgaaaaagtccaagaagccatcagagaaa
aaagcagccactccaaaacttggtaaagttctaaagcagcatcctgttgtttatgtttca
gagacagatgaagatgacgactttgtcaataagagaatttccctgaaaccaaaggagaat
ggggcatcagcaatcagttgtccaggaacaacgacggtgaaaaaggaagatgtaaaacca
cgagctaaacctaaaccattatctccagtgaagctgactcccacctcagctctcgatttc
tttggaacaagtagtgtccagcgatcagaaaagaaactggtagcaagtaaaaggaaggaa
ccctcacaaagcagggacagcacagtggacgatgaagctattgctaggcaactgcagctt
gaagaagattcagagctggagagacagttgcatgaagatgaagaatttgctaggactttg
gccatgttggatgaaacaccacagaagaaaaaggctcggagggattcagaagagcaggca
gtactgagcttcaagagcagtcctaatgtgacagacagatacaagcaatctcaaagagtg
aaagcaacaaactcagcaggtgaagcaaaacaacctaaatctgaaaattcaaaagggtcc
catttacccccacgatcaactgatggtaaactagcagaagagtcaactgataagaccttg
cctttgaaacctacctctaagcttgtggctcttaaacgaaaagaagagagtgctgaaaag
gaaagaggcactcaaagttcagtatcaaaagaaaaacttcagggaaaagaagagaagaaa
acaccaaagaaggagaaaatttctccaaagaaggctgagtctgtaagtcctgaggactct
gaaaagaagcgaaacaattatcaagcctaccgaagcttccttaatcgcgagggtccgaaa
gctctgggttccaaagagataccccaaggagctgaaaactgcttggaaggcctgacgttc
gtaattacaggagttctggagtctattgaaagagatgaggccaaatctctgattgaacgt
tacggaggaaaagtaactgggaatgtcagcaagaagacgaactacctggttatgggacga
gactgtggccaatctaaatgtgaaaaggcatcggctttagggacaaaaattattgatgag
gatggcctatttgatcttgttcgaactatgccaggcaaaaagtccaaatatgagctggca
gctgaatcggaggcaaagaaaacagagtcgagacataaaaagacaccacagaaaactgaa
actggcaaaaagaattttagccccctcaaaagggaagctgatattaaaaaaagaaattct
actcctgagaagggaggtaccttcaaatctgttaagaaagaaactgctgccgctcgaaag
cttgcagactttaaacagcaaacagcggagaagaaagaagtcccagaacctaagggaacc
ttggtctctgagattaatgaaaatggaacagagagattgctatgggtggataaatacaag
cctacgtctctcaaggcaatcattggacagcagggtgagcagagctgtgccaataaactt
ctgcgatggctccgaaactggcacaagaatacctcggaagacggacaagcaaaggccagc
aaacttggaggcaaagatgatggtattagttctaaagcagcattactttctggtccacct
ggagttggtaaaactactacagctgctttagtttgtaaggaactggggtatagctacgtg
gagctgaatgccagtgacactcgaagtaagaacagtctaaaggaagtagttgctgaatcg
cttaacaacaccagcatcaaagacttctgttctggcacatcctcatcagttagcgggaaa
catgtattgatcatggatgaagtggatggtatggcaggcaatgaagacagaggagggatt
caggagttgattggtttgattaaacacacaaaaatccccatcatctgcatgtgtaatgat
cgaaaccatcctaaaatccgttccttggtccactactgctttgatcttcgttttcagaga
cctcgtctagagcagattaagggtgccatgatgtctattgcgtttaaagaaggcttaaaa
attccaccacctgctatgcatgagataatcctggcagcaaatcaagacatcagacaggtt
ttgcataatcttaatatgtggtgtgcaaaagataagtcattgacttatgatgaggccaaa
acagatgccagcagagctaaaaaggatatcaaactgggcccttttgacgttgtccggaag
gtttttgctgctggagaggaggcttctcgtatgtctcttatagacaaatccgaccttttc
ttccacgactattccctagcacctctttttgtccaagagaactacgtacatgtgaaaccg
gctgctgctgggggagatctgaaaaagcacttgatgctcttgagtagagcagctgatagt
atatgtgatggtgatctagtggacaaacagattcgcaccaagcaaaactggaaccttcta
ccaacgcaggctatttattcgagtgttctccccggggagctgatgagaggttacatgtcc
cagtttcctgtctttcccagctggctggggaaattttcatccacaggcaaacacgaacgg
atcgttcaagaactggcaatgcacatgagtctcagaacccagatgtgcaagaggacagta
aacatggagtatctgtcttatctgcgggatgcacttgtccagcctttgaaagactttgga
gcagatggtgtacaacaagctataactttcatggactcttactgcctgatgaaagaagat
gttgaaaatatcatggaaataagcatgtggggaggcaaacccagtcctttttcaaagctg
gatcccaaggtcaaagccgcttttacacgtgcgtacaacaaagaggcacatctgactccg
tattcccttaattctgtgaagacatctaaaaggcagtcaggatccgtggcgacctctgaa
ctgagtgaagacctgaacgtggatgagatccagtctgatgaggatgagcaagacagtgtt
gaaagcgatgcaatgattaagcaaaaaaaggcgaagtcttccaagctgccaaaaagagag
aaaaacgaagaaccaacaaaaaaagaagggaaaaggaaggagaaaacaagacattaa
DBGET
integrated database retrieval system
