Aromatoleum bremense: pbN1_01250
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Entry
pbN1_01250 CDS
T07149
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
abre
Aromatoleum bremense
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abre03016
]
pbN1_01250 (truB)
Enzymes [BR:
abre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
pbN1_01250 (truB)
Transfer RNA biogenesis [BR:
abre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
pbN1_01250 (truB)
Prokaryotic type
pbN1_01250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QTQ30118
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All DBs
Position
complement(136407..137333)
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AA seq
308 aa
AA seq
DB search
MKASKQFRHQRRIVDGVLLLDKPRGLTSNAALQTARRLLNAAKAGHTGTLDPMATGLLPL
TLGEATKFSQMLLDADKAYEATVRLGIETDTGDAEGAPIATAPVHVTEDSIRQALMALTG
EIEQVPPMYSALKRDGKPLYEYARAGIEVERAARPVTIHSLELLGVEGDSLRIRADCSKG
TYIRTLATDLGRLLGCGGHLTELRRTRIGPFHVDEAVTLTALEAVPPESRTGLLAPVDAL
VVHLPRIELDAPQAGLLLQGRALPAPCGAAGLVRIYGEGRYLGLGECDGSGTLSPKRLVS
TVATVQQS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcatcgaaacaattccggcatcaacgtcggatcgtcgacggcgtcctgctgctc
gacaagccccggggcctgacgtcgaacgccgcactgcagacggcgcgccggctcctgaat
gcggcgaaggcagggcacaccggaacgctggacccgatggcgaccggattgctgccgctg
acgctgggcgaggcaaccaagttctcgcagatgctgctcgatgccgacaaggcctacgag
gccaccgtgcggctcggcatcgaaacggacaccggcgacgcggagggcgcgccgatcgca
acagctcccgtgcacgtgacggaggattcgatccgccaggcgctgatggcgctgaccggt
gaaatcgagcaggttccgccgatgtattcggcgctcaagcgcgacggcaagcccctgtac
gaatacgctcgcgcggggatcgaggtcgagcgcgccgcgcgccccgtgacgatccattcg
ctcgaactgctcggcgttgagggtgattcgttgcggatccgcgccgattgcagcaaggga
acgtatatccgcacgctggctaccgatctggggcgcttgctcggttgcggcggacatctc
actgaactgcggcggacaaggatcggaccattccacgtggacgaggccgttacgctcacg
gcgctggaagcggtgcctccggagtcgcgcaccgggctgctggcgccggtcgatgcgctg
gtggttcatctgccgcgcatcgaactcgatgccccccaggcgggcctgcttctgcaggga
cgcgcgcttccggctccctgcggcgcagcggggctggtgcgcatttacggcgaaggccgt
tacctggggcttggggaatgcgacggaagcggcacattgtcgccgaaacgcctcgtttcg
acggtcgcaacagtgcaacaatcttga
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