Aromatoleum bremense: pbN1_01490
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Entry
pbN1_01490 CDS
T07149
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
abre
Aromatoleum bremense
Pathway
abre03410
Base excision repair
abre03430
Mismatch repair
abre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
pbN1_01490 (recJ)
03430 Mismatch repair
pbN1_01490 (recJ)
03440 Homologous recombination
pbN1_01490 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_01490 (recJ)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
pbN1_01490 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
pbN1_01490 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
pbN1_01490 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QTQ30141
LinkDB
All DBs
Position
163745..165436
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AA seq
563 aa
AA seq
DB search
MTRIQSRNAPPRAVQRLIDGGTHPLLARIYAARGVSQREELDYGLKALLPPAALRGTHEA
AQLLADAIEAGARMVIVADYDCDGATACAVGIRALRAFGADVGYLVPNRFEYGYGLTPAI
VELATRMEPDLLITVDNGIASVEGIAAARSYGMATLVTDHHLPGDTLPEADVIVNPNQPG
CDFPSKALAGVGVMFYTMLALRAELRERGAFSGRQEPNLGELLDLVALGTVADVVKLDHN
NRILVAQGLARMRAGRMQPGIRALFAAAAREPERANTFDLGFALGPRLNAAGRLSDMSLG
IECLISDDMGRALNIAQELDKLNRERRGIEQGMQEDALVRLAGFDPGQSATVSLFEPDWH
QGVIGIVAGRIKEKLHRPVVAFARGADGELKGSGRSIANVHLRDALDLVAKRHPGLILRF
GGHAMAAGLTIRETDYARFQAAFEEIVHSLVGTADLTRTLETDGVLESGYMTLDSARLIE
QDIWGQGFAAPVFEDRFRVDNQRLLKDKHLKLQLSKNGVRFDAIRFNFAEGAGASIHAAY
RLAPNEYNGVTSLQLMLEHFDTV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcatccagtcccgcaacgccccaccccgcgccgtccagcgcctcatcgacggc
ggcacccatccgctgctcgcgcgcatctatgcggcgcgcggggtctcgcagcgcgaggag
ctcgactacggcctcaaggcgctgctgccgcccgcggcgctgcgcggcacccatgaagcc
gcgcaactgctcgccgacgcgatcgaggccggcgcgcggatggtgatcgtcgccgactac
gactgcgacggcgccaccgcctgcgcggtcggcatccgcgcgctgcgcgctttcggcgcc
gacgtcggctatctcgtgccgaaccgcttcgaatacggctacggcctcacgccggcgatc
gtcgagctggccacgcggatggagcccgacctgctgatcaccgtcgacaacggcatcgcc
agcgtcgaagggatcgccgcggcgcgcagctacggcatggcgacgctggtcaccgaccat
cacttgcccggcgacaccctccccgaagcggacgtcatcgtcaatccgaaccagccgggc
tgcgacttcccgagcaaggcgctcgccggcgtcggcgtgatgttctacacgatgctcgcg
ctgcgcgccgaactgcgcgagcgcggcgcgttctccgggcgccaggaaccgaacctcggc
gagctgctcgacctcgtcgcgctcggcaccgtcgccgacgtcgtcaagctcgaccacaac
aaccgcatcctcgtcgcacaggggctcgcgcggatgcgcgccgggcgcatgcagcccggc
atccgcgcgctgttcgccgcggccgcccgcgagcccgagcgtgcgaacactttcgacctc
ggtttcgcgctcggcccgcgcctcaatgccgccgggcggctgtcggacatgagcctcggc
atcgaatgcctgatcagcgacgacatgggccgcgcgctgaacatcgcgcaggaactcgac
aagctcaaccgcgaacggcgcggcatcgaacaaggcatgcaggaagacgcgctggtgcgg
cttgcgggtttcgatcccgggcagagcgcgaccgtgagcctgttcgagcccgactggcac
cagggcgtcatcggcatcgtcgccgggcgcatcaaggagaaactgcaccggcccgtcgtc
gcgttcgcgcgcggcgcggacggcgaactgaagggatcggggcgctcgatcgcgaacgtg
cacctgcgcgacgcgctcgaccttgtcgccaagcggcatcccggcctgattctgcgcttc
ggcggccacgcgatggcggcgggcctgacgatccgcgaaacggattacgcgcgcttccag
gcggcgttcgaggagatcgttcactcactcgtcggcaccgccgacctgacgcgcacgctg
gaaaccgacggcgtgctcgaaagcggttacatgacgctcgattcggcgcggctgatcgaa
caggacatctggggacagggcttcgcggcgccggtattcgaggaccgtttccgcgtcgac
aaccagcgtctgctcaaggacaagcacctgaagctgcagctgtcgaagaacggcgtgcgc
ttcgacgcgatccgcttcaacttcgccgagggtgcgggggcgagcatccatgccgcctac
cggctcgcgccgaacgaatacaacggcgtcaccagcctgcagctgatgctcgaacacttc
gacaccgtgtaa
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