Aromatoleum bremense: pbN1_03290 Help Entry pbN1_03290        CDS       T07149                                  Symbol rne Name (GenBank) Ribonuclease E   KO K08300   ribonuclease E [EC:3.1.26.12] Organism abre  Aromatoleum bremense Pathway abre03018   RNA degradation Brite KEGG Orthology (KO) [BR:abre00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     pbN1_03290 (rne)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:abre03019]     pbN1_03290 (rne)    03009 Ribosome biogenesis [BR:abre03009]     pbN1_03290 (rne) Enzymes [BR:abre01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.26  Endoribonucleases producing 5'-phosphomonoesters     3.1.26.12  ribonuclease E      pbN1_03290 (rne) Messenger RNA biogenesis [BR:abre03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      pbN1_03290 (rne) Ribosome biogenesis [BR:abre03009]  Prokaryotic type   rRNA processing factors    pbN1_03290 (rne) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_E_G RNase_E_G_Thio S1 zf-C2HC Anti-TRAP Motif Other DBs NCBI-ProteinID:  QTQ30321 LinkDB All DBs Position 351240..354257 Genome browser AA seq 1005 aa AA seqDB search MKRMLFNATQAEELRVAIVDGQKLIDLDIESAAKEQRKSNIYKAVITRIEPSLEAAFVDY GGERHGFLPFKEISRTYFATGADAGKVRIQDALKEGQELIVQVEKDERGNKGAALTTYIS LAGRYLVLMPNNPRGGGVSRRVEGDERTELRDVMDQLEIPSGMSLIARTAAIGRNAEELQ WDLNYLLQLWRAIDGAAQSQSGAFLIYQEGSLVIRAIRDYFQPEIGEILIDTDDVYEQAR QFMSHVMPANVNRVKRYSDDVPLFSRFQIEHQIESAYSRQVTLPSGGAVVIDHTEALVSI DVNSGRSTKGEDIEETAFRTNLEAAEEIARQLRLRDLGGLIVIDFIDMESQKNQREVEGL LRDALRHDRARVQTGKISRFGLLELSRQRLRPALAETSYIPCPRCNGTGHIRSTESSALH ILRILEEEAMKENTGAVHLQVPVDVATFLLNEKRVDIAHIEVRHKIQLIIIPNRHLETPH HEIIRLRHDQLNQEEVALASYQMVGKPAEIDLRLPSKDDNKPPRAEAVVKGISPAQPAPI VEPKPEPVTAPAPVAKPAGLFQRLFGWLRSEKPAVTPQRVPEVAQKQEPRPRVERSDTRR GNNRNRRDGQQRTERGERDESTLAAQAARGSMRSERAERPERPERTERPEAVVDRGDRPA RPERDNGGRTRQGRGPRSQPKQGEAVVDNVVELPVSTVAIAAPVAPMEAAAIAPAAEEGA AEKRRRRSRGRRDRRGTEQQAEVAASGDETADISAEAAMPIVETAPETTQVVSAEPVAEA AAELPVAAAEAAAPMPVAATSPEPVVVTAEAAPLPVSLHPAANIEAESPAEAEPAFAPVK LETAAEPVAEREAEIEPALEAKIAPEAAIEAAERARESLQAGLMEPLAPAGPEPVQASAS EELAEAVTEQAPTAAPAQNVVAPETEVAVTEAEVSTAESRAPSAPIDLGVNLAESGLVMI ETSRDKVQELASTAGETPARPLGRRPRPAPVIVNEPLQQVETHSK NT seq 3018 nt NT seq  +upstreamnt  +downstreamnt atgaagcgcatgcttttcaacgcgacgcaggccgaggaattgcgcgtcgcgatcgtggac ggtcagaaactgatcgacctcgatatcgaatcggccgccaaggaacaacgcaagagcaac atctacaaggccgtcatcacccgcatcgaaccgagtcttgaagccgcattcgtcgattac ggcggcgagcggcacgggtttctgccgttcaaggaaatttcccgcacctatttcgccacc ggcgccgatgccggcaaggtccgcatccaggacgcgctgaaggaaggccaggaactcatc gtccaggtcgaaaaggacgaacggggcaacaagggcgctgcgctcaccacctacatctcg ctggcgggccgttaccttgtcctgatgccgaacaacccgcgcggcggcggcgtgtcgcgt cgcgtcgagggtgatgaacgcaccgagctgcgtgacgtcatggatcagctcgaaattcct tccggcatgagcctgatcgcgcgtaccgccgcgatcggccgcaacgccgaagagctgcag tgggacctgaactacctgctgcaactgtggcgcgcgatcgatggcgcagcgcagtcgcag tccggcgctttcctgatctaccaggaaggcagcctcgtgatccgtgcgatccgcgattat ttccagcccgagatcggcgaaatcctgatcgacaccgacgacgtgtacgaacaggcgcgg cagttcatgtcgcacgtgatgccggccaacgtaaaccgcgtcaagcgctacagcgacgac gtgccgctgttctcgcgcttccagatcgagcaccagatcgaatccgcgtactcgcgccag gtcaccctgccgagcggcggggcggtcgtcatcgaccataccgaggcgctggtgtcgatc gacgtaaactccggtcgctcgacgaagggtgaggacatcgaggaaaccgcgtttcgcacc aacctcgaagcggccgaggaaatcgcgcgccagctgcgtttgcgcgacctcggcggcctg atcgtcatcgatttcatcgacatggagtcgcaaaagaaccagcgcgaagtcgaaggtttg ctgcgcgacgcgctgcggcatgatcgtgcgcgcgtccagaccggcaagatcagccgcttc ggcctgctcgaactgtcgcgccagcgcctgcgcccggcactggccgaaaccagctacatc ccgtgcccgcgctgcaacggcacgggccatatccgcagtaccgaatcgtcggcgctgcac atcctgcgcatcctcgaagaggaggcgatgaaggaaaacaccggcgccgtgcatctgcag gttccggtcgacgtcgcgaccttcctgctcaacgagaagcgcgtggacatcgcgcacatc gaggtccgtcacaagatccagctgatcatcatcccgaaccgccacctggagacaccgcac cacgaaatcattcgtctgcgccatgaccagctgaaccaggaagaagtcgcgctggcgagc taccagatggtcggcaaacctgcggaaatcgatctgcggctgccgtcgaaagacgacaac aagccgccgcgcgcggaagccgtcgtgaagggaatctcaccggcccagcccgccccgatc gtcgaaccgaaacccgaaccggtgacggcgcccgcccccgtcgcgaagcccgccggactg ttccagcgcctgttcggctggctgcgcagcgagaagccggccgtgacgccgcagagggtt ccggaggttgcccagaagcaggagccccgcccgcgggtcgagcgcagcgatactcgccgc ggcaacaatcgcaaccgtcgcgatggccagcaacgcaccgaacggggtgagcgtgacgag tcgacattggccgcccaggctgcaagagggtcgatgcgcagcgaacgcgcggagcggccc gaacggcccgagcgtacagaacgacccgaggccgtcgtcgaccgcggcgacaggccggca cgtccggagcgtgacaacggcggccgtacgcgccagggccgtggtccgcgcagtcagccg aagcagggtgaagccgtggtagacaacgtcgtggaattgccggtcagtaccgtcgcaatc gccgccccggtcgcgccgatggaggccgcagcaatcgctcccgcagccgaagagggcgcc gccgagaagcgtcgtcgccgcagccgcggccgccgtgaccggcgcggaaccgaacagcag gcagaagttgctgcatcgggcgacgaaaccgcggatatctcggccgaagcggctatgccg atcgtcgaaacagcaccggaaacgacacaagtcgtcagtgccgagccggttgccgaggcc gccgctgagctgcccgtcgctgccgcggaagctgccgccccgatgcctgtcgctgccacc tcgccggaacctgtcgttgtcacagccgaagccgcaccgttgcctgtctctctgcatcca gcagccaacatcgaggctgaatcgcccgcggaagccgagccggcgttcgcgccggtgaag ctcgaaaccgctgcggaacctgtggccgaaagagaagctgaaattgaaccggcactcgaa gcgaaaattgcaccggaagcagcgatcgaagcggccgagcgtgcgcgcgaatcgctgcag gccggcctcatggagcctctcgcccctgcaggccccgaaccggtacaggcatccgcgagc gaggaattggctgaggccgtgaccgagcaggcgcccactgcggctcccgcgcaaaatgtc gtcgcgccggaaaccgaagtcgccgtgaccgaagccgaagtcagtacggccgagtcccgg gcgccctccgctccgatcgacctgggcgtgaacctggccgaaagcggcctggtgatgatc gagaccagccgcgacaaggtgcaagagctggcgagtacggcgggcgagactcctgcccga ccgctgggacgccgtccgcgtccggcgccggtcatcgtcaacgaaccgctgcagcaggtc gaaacccactccaaataa

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