Aromatoleum bremense: pbN1_07280
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Entry
pbN1_07280 CDS
T07149
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
abre
Aromatoleum bremense
Pathway
abre00061
Fatty acid biosynthesis
abre00071
Fatty acid degradation
abre01100
Metabolic pathways
abre01212
Fatty acid metabolism
abre02024
Quorum sensing
abre04146
Peroxisome
Module
abre_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
pbN1_07280 (fadD)
00071 Fatty acid degradation
pbN1_07280 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
pbN1_07280 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
pbN1_07280 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
abre01004
]
pbN1_07280 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abre04147
]
pbN1_07280 (fadD)
Enzymes [BR:
abre01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
pbN1_07280 (fadD)
Lipid biosynthesis proteins [BR:
abre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
pbN1_07280 (fadD)
Exosome [BR:
abre04147
]
Exosomal proteins
Exosomal proteins of breast milk
pbN1_07280 (fadD)
Exosomal proteins of breast cancer cells
pbN1_07280 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Thia_YuaJ
AMP-binding_C_2
HK_sensor_dom_bact
Motif
Other DBs
NCBI-ProteinID:
QTQ30720
LinkDB
All DBs
Position
complement(765174..766841)
Genome browser
AA seq
555 aa
AA seq
DB search
MEKIWLQSYPRGVPAEIDPDEFSSIGDLFSRSVRQFGDRPAYINMGKGVSYAELDRLSAR
FAGFLQGALKLAKGARVALMMPNMLQYPIAMFGVLRAGYVVVNVNPLYTARELEHQLRDS
GAETIVIIENFASTLEHVLPKLRMPHIVVTSLGEMLGFPKSLIVNLVVRQVKKLVPPWNL
PGHVSFSAALSRGAAFPLEPVSVGHDDIAFLQYTGGTTGVAKGAVLTHRNIIANLQQAHA
WIRPFLHEGEEIIITALPLYHIFSLTANCLTFFKLGATNVLITNPRDIPGFIKELAKYKF
TAITGVNTLFNALLNNPDFAKLDFSRLNIALGGGMAVQQQVAERWGRITGKPLIEAYGLT
ETSPAVTINPLDLPAFNHSIGLPVSSTEVSIRGDDGSEMPFGQPGELCVRGPQVMREYWN
RPEDTAHVFTPDGFLRTGDIATIDEKGFVRIVDRKKDMILVSGFNVFPNEIEDVVASHPG
VLEVAAVGVPDERTGEAVKVFIVRKDPSLTREMIIAHCRESLTAYKVPHLVEFRDELPKT
NVGKILRRLLRDGKA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatctggctgcagagctatccccggggcgttcccgcagaaattgatcccgac
gagttcagctccatcggcgacctgttcagccggagtgtgcggcagttcggcgaccggcca
gcctacatcaacatgggcaagggtgtcagctatgccgaactcgaccggttgtccgcccgg
ttcgcgggcttcctgcaaggcgcactgaagcttgcgaagggtgcgcgcgttgcgctgatg
atgcccaacatgctgcagtacccgatcgcaatgttcggagtgctcagggctggctatgtc
gtcgtcaacgtcaatccgctttacaccgctcgtgaactggagcatcagctccgcgactcc
ggtgccgagacgattgtcatcatcgagaatttcgccagcacgctcgaacacgtgctgccg
aagctcaggatgcctcatatcgtggtcacgagcctcggcgaaatgctcggctttccgaaa
agcctgatcgtcaatctggtcgtccggcaggtgaagaagctggtgccgccatggaatctc
ccgggccatgtgagcttttcggcggcgttatccaggggcgccgcgttcccgctcgagccg
gtgagcgtcggacacgacgacattgcctttctccaatacacgggtggcaccaccggcgtg
gcgaagggggcggtactgacccatcgcaacatcatcgcgaatttgcagcaggcacacgcc
tggatccggcccttcctgcatgaaggcgaggaaatcatcatcacggcgcttccgctctat
catattttttccctgactgcgaactgcctgacgttcttcaagctcggcgcgacgaacgtg
ctgatcaccaatcctcgcgacattccaggcttcatcaaggaactcgccaagtacaaattc
accgccatcaccggggtcaatacgctgttcaatgcgttactgaacaacccggattttgcc
aagctcgatttctcccggctcaacatcgcgctcggcgggggaatggcggttcagcagcag
gtggcggagcggtggggcaggatcaccggaaagccgcttatcgaggcctacgggctgacc
gaaacatcgcccgcggtgaccataaacccgctggatctgcccgccttcaatcattcgatc
ggcctgcccgtttcatcgacggaagtgagcattcgcggcgacgacggcagcgaaatgccg
ttcgggcagcccggcgagctgtgcgtgcgagggccacaggtgatgcgcgagtactggaat
cggccggaggatacggcccacgtctttacgcccgatggtttcctccgcaccggtgacatc
gcgacgatcgacgaaaaaggctttgtgcgcatcgtcgatcgcaagaaagacatgatcctg
gtgtcaggtttcaacgtctttccgaacgagatcgaggatgtcgtcgcaagccatccgggc
gtgctggaggtcgccgcggtgggcgtgccggacgagcgcaccggcgaagccgtcaaagtg
ttcatcgtgcgcaaggatccctcgctcacccgcgagatgatcattgcccattgtcgcgaa
agcctgaccgcatacaaagtccctcacctcgtggagtttcgcgacgagttgccgaagacg
aatgtcgggaagatcctgcggcgcctgttgcgggacgggaaggcctga
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