Aromatoleum bremense: pbN1_11650
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Entry
pbN1_11650 CDS
T07149
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
abre
Aromatoleum bremense
Pathway
abre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
pbN1_11650 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_11650 (mutM)
Enzymes [BR:
abre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
pbN1_11650 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
pbN1_11650 (mutM)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
pbN1_11650 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5817
Motif
Other DBs
NCBI-ProteinID:
QTQ31157
LinkDB
All DBs
Position
complement(1208129..1208944)
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AA seq
271 aa
AA seq
DB search
MPELPEVEITCRGIRPLVAGRTLTALEVRNPRLRQPVPADLAETLVGERLQGVRRRAKYL
LLDFPHGSVLVHLGMSGSLRVVSADEPAGVHDHVDLVFGAAALRLRDPRRFGLVLWHAGD
GLSHPLLAALGREPLESGFTGAWLHEATRGVRMSIKQTLMDAHRVVGVGNIYASESLFRA
RIHPLAPAGAIGPQRLARLAASVRETLLAAIDAGGSTLRDFVGGDGRAGYFQQQYFVYGR
EGLACRVCATPVRRVVTGQRSTFFCPRCQRR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccggaggtggaaatcacgtgccgcggcattcgcccgctcgtcgccggg
cggacgctgaccgcgctcgaagtgcgcaatccgcggctgcgccagccggtgcccgcggat
ctcgcggaaacgctcgtcggcgagcgactgcagggcgtccggcgccgcgcgaaatacctg
ctgctggattttccgcacggcagcgtcctcgtgcatctcggcatgtccggcagcctcagg
gtggtgtcggctgacgagcccgccggcgtgcacgatcacgtcgacctggtgttcggcgcc
gcggcgctgcggctgcgcgatccgcgccggttcggcctcgtgctgtggcatgcgggcgac
ggtttgtcccacccgctgctcgcggcgctcgggcgcgagccgctcgagagcggttttacc
ggcgcctggctgcatgaggcgacgcgaggagtgcggatgtcgatcaagcagacgctgatg
gatgcgcaccgtgtcgtcggggtcggcaacatctacgcgtccgagagcctgttccgtgcc
cgcatccatccgctcgcaccggccggcgcgatcgggcctcagcgcctcgcgcgccttgcc
gcgtcggtgcgcgaaacgctgctcgcggcgatcgacgcgggcggcagcaccttgcgggac
ttcgtcggcggggacgggcgcgccgggtatttccagcagcagtacttcgtgtacggacgc
gaaggcttggcgtgccgggtgtgcgcaacgccggttcgccgggtcgtgaccggccagcgc
tcgacttttttctgcccgcgctgccagcgtcgttga
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