Aromatoleum bremense: pbN1_14740
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Entry
pbN1_14740 CDS
T07149
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
abre
Aromatoleum bremense
Pathway
abre00550
Peptidoglycan biosynthesis
abre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
pbN1_14740 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
abre01002
]
pbN1_14740 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
abre01011
]
pbN1_14740 (dacB)
Enzymes [BR:
abre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
pbN1_14740 (dacB)
Peptidases and inhibitors [BR:
abre01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
pbN1_14740 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
abre01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
pbN1_14740 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QTQ31466
LinkDB
All DBs
Position
1534111..1535547
Genome browser
AA seq
478 aa
AA seq
DB search
MTSALLRVLGALFLGGWLATAHPSHASALPEPVAQALAAAHIPQSAVALWVQAVDDGEPQ
LRVNAERPMNPASVMKLVTAFAAFERFGPAHVWTTRVAATGTIRAGVLEGDLYLIGGADP
LLSVERLWTLLRKIRALGIETIRGDLVLDGSALRLPQHDPAAFDDRALRPYNSGAHGLLV
NFNTLNLTLLPAGRPGERVTVAASPPLKGLDIDNRIVIAAGECGVWYRDLDALLEAAPGG
PRLVLLGSLPASCGQRDWATAPLPPERFGVAAVAALWAELGGKLEGVARPGTVPSDAAPL
LTGSSPPLADVVREMNKWSSNVIARQLLATLGATDATSPDMVAGGAALTRALLDAAGIST
AGLFVENGSGLSRSESVSARTLGEILLTAWRRPYMPEFIAALPVAGLDGTARGRLHDSPA
RGQAHIKTGSINGVRAMAGYVLDRNGRRHVVAMLANDVAAGSSQAAQDALLEWVWDAR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgcattgttgcgcgtgctcggcgcgctgttcctcggcggctggctcgccacc
gcccacccctcccacgcttccgcgctgccggagccggtcgcacaggccctcgctgccgcg
cacattccgcaatcggccgtcgcgctgtgggtgcaggccgtcgacgacggcgaaccgcaa
ctgcgcgtaaacgccgagcggccgatgaatccggcgtccgtgatgaagctcgtcaccgcg
ttcgccgcgttcgagcgcttcggcccggcgcacgtgtggacgactcgcgtcgcggcgacc
gggaccatccgcgccggcgtgctcgaaggcgacctctacctgatcggcggcgcggacccg
ctgctgagcgtcgagcggctgtggacgctgctgcgcaagatccgcgcgctcggcatcgag
acaatccgcggcgatctcgtgctcgacggctcggcgctgcggctgccgcagcacgacccg
gcggcgttcgacgatcgcgcgctgcgcccgtacaacagcggcgcccacggcctgctggtg
aatttcaacacgctgaatttgacgctgctgcccgcaggcaggccgggcgagcgggtcacg
gtcgcggccagcccgccgctgaaagggctcgacatcgacaaccgcatcgtcatcgcagcg
ggcgagtgcggggtgtggtaccgcgacctcgacgcgttgctcgaagccgcgccgggcggt
ccgcgcctggtgctgctcggcagcctgccggcgagctgcggccagcgcgactgggcgacg
gcgccgctgccgccggaacgcttcggcgtcgccgccgtcgccgcgctgtgggcggaactc
ggcggcaagctcgaaggcgtcgcgaggccgggcacagtgcccagtgatgccgcgccgctg
ctgaccggcagctcgccgccgctcgcggacgtcgtgcgcgagatgaacaaatggtcgagc
aacgtgatcgcgcgccagctgctcgccaccctcggcgccaccgacgcgacatcgcccgac
atggtcgccggcggcgcggcgctcacgcgggcgctgctcgacgcggcgggcatcagcacg
gccgggctgttcgtcgagaacggctccggcctgtcgcgcagcgagagcgtcagcgcccga
accctcggcgaaatcctgctcactgcgtggcggcgaccgtacatgccggaattcatcgcc
gcgctgccggtcgccggcctcgacggcaccgcgcgcggccggctccacgacagcccggcg
cgcggccaggcgcatatcaagaccggctcgatcaacggcgtacgcgcgatggccggctac
gtgctggaccgcaacggccgccgccatgtcgtcgcgatgctggccaacgatgtcgcggcg
ggcagcagccaggcggcgcaggacgcgctgctcgaatgggtgtgggacgcgcgctga
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