Aromatoleum bremense: pbN1_17090
Help
Entry
pbN1_17090 CDS
T07149
Symbol
recD
Name
(GenBank) RecBCD enzyme, subunit D
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
abre
Aromatoleum bremense
Pathway
abre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
pbN1_17090 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_17090 (recD)
Enzymes [BR:
abre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
pbN1_17090 (recD)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
pbN1_17090 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
UvrD-helicase
DEAD
AAA_22
MukB
SLFN-g3_helicase
nSTAND3
RecD_N
AAA_28
AAA_16
CbiA
AAA_29
AAA_23
T2SSE
TrwB_AAD_bind
FtsK_SpoIIIE
AAA
DO-GTPase1
ATPase
Flavi_DEAD
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QTQ31700
LinkDB
All DBs
Position
complement(1765147..1766994)
Genome browser
AA seq
615 aa
AA seq
DB search
MNPLDLRPDLTAEAELAHGFAAHVVSWARAAGAPDACLPRLRAAAMRASLAVAAGHVCVP
LAELVAVDETVAGLREALLASGVVGRAAAPEPRPLLLDAADRLYLRRHYDWERRLATALV
ARAASPLPAPPRATVERLGELFAANAARLGGRADWQKLAVALALERRLTVISGGPGTGKT
TTVAALLACLLSAEPELRVALAAPTGKAAARMLDALRARSASVPEEVRGRLPQTSHTLHR
LLGVTPQPGRFRHHAGNPLALDVLVVDEASMLDLALATRLVDALPPHARLILLGDKDQLA
AVEAGAVFAELCADASLEASCVARLAALTGTPAGRIAPPPPRRATPLAGSVVWFVESHRF
SADSGIGRLAAGINAGAGDEVLAWLREGADSSVEWLADEGDAPAAAVLARLEQGYAGYLD
ALRTYGGDPAPVFAAFDRFRVLCAVHGGPRGIDATNERLSRHARAALAHAPGAVAASPWY
PGRPVIVLKNDYLLRLYNGDVGICLPDAHGELRVVFPDPAGGWRELAPLRLPAHDTAFAM
TVHKAQGSEFAKVLVLLPATPVKVMTRELLYTGVTRAARKVVLAGPEAVLLAACGTPTVR
ESGLIDRLVEAGGQI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctctcgacctgcgccccgacctgactgccgaagccgagctcgcgcacggtttt
gccgcgcatgtcgtgagctgggcgcgcgccgccggggcaccggacgcctgcctgccgcgg
ctgcgcgcggcggcgatgcgcgcgagcctcgccgtcgccgccgggcacgtgtgcgtgccg
ctcgccgagctcgtcgccgtggacgagacggttgccgggctgcgcgaggcgctgctcgcg
agcggcgtcgtcggccgcgcggcggcgcccgagccgcggccgctgctgctcgacgcggcc
gaccgcctgtacctgcgccgccattacgactgggaacggcgtctcgcgaccgcgctcgtc
gcgcgcgccgcaagcccgctgccggcgccgccgcgggccaccgttgagcgcctcggcgaa
cttttcgccgccaacgccgcgcggctcggcgggcgcgccgactggcagaagctcgccgtc
gcgctcgcgctcgaacggcgcctgaccgtcatcagcggcgggccgggcaccggcaagacg
acgaccgtcgcggcgctgctcgcatgcctcttgagtgccgaaccggaactgcgggtcgcg
ctcgccgcgccgaccggcaaggccgccgcgcgcatgctcgacgcgctgcgcgcgcgcagc
gcctccgtgccggaagaggtccgcgggcggctgccgcagacctcgcacacgctgcatcgc
ctgctcggcgtgacgccgcagcccggccgcttccgccaccacgccggcaatccgctcgcg
ctcgacgtgctggtcgtcgacgaggcgtcgatgctcgatctcgcgctcgcgacgcggctc
gtcgacgcgctgccgccgcacgcgcgcctgatcctgctcggcgacaaggatcagctcgcc
gcggtcgaggccggcgcggtgttcgccgagctgtgcgccgacgcgtcgctcgaggcttca
tgcgtcgcgcggctcgccgcgctgaccggcacgccggccgggcgcatcgcgccgccgccg
ccgcgccgcgcgacgccgctcgccggcagcgtcgtgtggttcgtcgagagccatcgtttt
tccgccgactccggcatcggccggctcgccgccggcatcaacgcgggtgccggcgacgaa
gtgctcgcctggctgcgcgagggcgccgattcgtcggtcgaatggctcgcggacgagggc
gatgcgcccgccgccgcggtgctcgcacggctggagcagggctatgccggttatctcgac
gcgttgcgcacgtacggcggcgatccggcgccggtgttcgccgcgttcgaccgttttcgc
gtgctgtgcgcggtgcacggcgggccgcgcggcatcgatgcgaccaacgagcggctgtcg
cgccacgcgcgcgccgcgctcgcgcatgcacccggcgccgtcgctgcgtcgccgtggtac
ccgggccggccggtaatcgtgctgaagaacgattacctgctgcggctctacaacggcgac
gtcggcatctgcctgccggacgcgcacggcgagctgcgcgtcgtgttccccgaccctgcc
ggcggctggcgcgaactcgcgccgctgcgcctgcccgcccacgacaccgcgttcgcgatg
acggtgcataaggcgcaaggctcggagttcgcgaaagtgctggtgctgctgccggcgacg
ccggtgaaagtgatgacgcgcgaactgctctacaccggcgtcacccgcgctgcgcgcaaa
gtcgtgctcgcggggccggaagcggtgctgctcgccgcgtgcggcacgccgaccgtgcgc
gaaagcggcctgatcgaccgcctggtcgaagctggcgggcaaatttag
DBGET
integrated database retrieval system
