Aromatoleum bremense: pbN1_18930
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Entry
pbN1_18930 CDS
T07149
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD, delta subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
abre
Aromatoleum bremense
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_18930 (sbcD)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
pbN1_18930 (sbcD)
Archaeal homologous recombinant proteins
pbN1_18930 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QTQ31883
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Position
complement(1988322..1989596)
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AA seq
424 aa
AA seq
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MRLLHTSDWHLGQSLHDFDRTYEHQQFLDWLLALIATERPDVLLIAGDVFDNANPSAGAQ
HQLYRFLTAARKRMPHLSIVIIAGNHDSPGRLEATSPFLELFDAAVVGHVHRRADQSIDI
ERLVVPLKNREGTVAAWCLAVPFLRPGDVPRVADEGEQDAYLAGVAELYRQALAVAQSRR
QPGQAIVAMGHCHMAHGKLSEHSERRIVIGGAEALPAGIFDPAIAYVALGHLHLAQPVGG
RDHIRYSGSPLPMSFAELDYPHQVVCVELDGEAVAEIRPVRVPRSVELIRVPKTHASIDE
VLPLLETLDPGAAAEGPVHAHPYLEVRVRLDAPEPGLRARIEATLAGRPVRLARIDPVSS
RSGDAPASSAMSLGDLERLAPETVFARLCEQRLGGHPDERKVLLGALAAAFAELAIEPAE
GASA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcctgcacacttccgactggcatctcggccagtccctgcatgacttcgaccgc
acctacgaacatcagcaattcctcgactggctgctggccctgatcgccaccgagcggccc
gatgtcctgctgatcgccggcgacgtcttcgacaacgcgaatccgtcggccggcgcgcag
caccagttgtaccgtttcctcaccgcggcccgcaagcgcatgccgcatctgtcgatcgtc
atcatcgccggcaatcacgactctccggggcggctcgaggccacttcgccgttcctggag
ctgttcgacgccgccgtcgtcggccacgtccatcgccgtgccgatcagtcgatcgacatc
gaacgcctggtggtgccgctgaagaatcgtgaagggaccgtcgccgcgtggtgcctcgcg
gtcccgttcctgcgcccgggcgatgtgccccgcgtcgccgacgaaggcgagcaagacgcg
tacctcgcgggcgtcgccgagctctatcgccaggcacttgcggtggcgcaatcgcgtcgc
cagccgggccaggcgatcgtcgccatgggccattgtcacatggcccacggcaagctctcg
gaacactcggaacgacgcatcgtcatcggcggcgccgaggcgctgcccgccggcattttc
gacccggcgatcgcctacgtcgcgctcgggcacctgcatctggcgcaaccggtcggcggc
cgcgaccacatccgctacagcgggagcccgttgccgatgtcgttcgccgagctcgactat
ccgcaccaggtcgtatgcgtcgagctcgacggtgaagcagtcgccgaaattcgtccggta
cgtgtgccgcgcagcgtggagttgatccgcgtgccgaagacccatgcgtcgatcgacgag
gtcctgcccttgctcgaaacgctcgatccgggcgcggcagccgaaggtcccgtgcacgcc
catccctacctcgaagtgcgcgttcggctcgacgcccctgagccgggcctgcgcgcccga
atcgaggcgacgcttgccggcaggcccgtgcggctcgcgcgcatcgacccggtcagttcg
cgcagcggcgatgcgcccgccagttccgcgatgtcgctcggcgacctggaacggctcgcg
ccggaaacggtgttcgcgcgcttgtgcgaacagcgcctcggcggccatcccgacgagcgc
aaagtcctgctcggcgcgctcgcggcggccttcgccgaactcgcgatcgagcccgccgag
ggggcgtccgcatga
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