Aromatoleum bremense: pbN1_19230
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Entry
pbN1_19230 CDS
T07149
Symbol
pdeR
Name
(GenBank) Phenol degradation transcriptional regulatory protein PedR, sigma54-dependent
Organism
abre
Aromatoleum bremense
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
V4R
HTH_8
AAA_2
AAA_5
Mg_chelatase
AAA
HTH_24
HTH_1
HTH_30
HTH_AsnC-type
HTH_28
AAA_3
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QTQ31913
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Position
2020875..2022611
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AA seq
578 aa
AA seq
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MTKLQDASRADGADLRSRVHFCSDTGQIWLHEHRMLLVHAEAQASLRKELIDTLGMNRAR
GLLLRMGYASGMRDAELVRTRTQDMTDMEVFMTGPRLHALEGNVGVVPIRVEFDRASGSF
YGEFRWINSWEGQSHRRHFGTHDEPVCWTQIGYACGYTSAFMGRSILYKEVECVGMGDEG
CRIVGKPVEEWEDADELMRFFTPESIADQLIDLQTQVVQLRSTIGEKNQLPGDMIGTSPG
FRAALALLSQAAASHISVLLLGETGVGKELFARALHEMSTRRDRPLVAINCAAIPHDLVE
SELFGVEKGAYTGALMSRPGRFERADGGTLFLDEIGELPLTAQSKLLRVLQEGEVERLGD
DRVRKINVRLVAATNAGLPQLVKEGRFRADLYYRLNAYQVNIPPLRERREDISVLAKHFL
EKHAAINGKKLLGFTDKAKRALTTYAWPGNIRELQNTVERGVILAPHGTRIEVEHLFLSW
GDEAREFGLDPDGKLDAGEGDAGKSICDAVCDGTMTLDQVEAMLIEAATDKARGNLSSAA
RMLGLSRPQLAYRLKRLHESGHARATPQPLREPGSVES
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagctccaagacgcgagccgcgcagacggcgctgacctgaggtcacgcgtgcat
ttctgttccgacaccggccagatctggctgcacgaacaccgcatgctgctcgtgcatgcc
gaggcccaggcgtccttgcgcaaggagctcatcgacacgctcggcatgaaccgtgcgcgc
gggctgctgttgcgcatgggctacgcttcgggcatgcgcgacgccgagctcgtgcgcacc
cggacgcaggacatgacggacatggaagtcttcatgaccggaccgcggctgcatgcgctc
gaaggcaacgtcggcgtcgtgccgatccgcgtcgagttcgaccgcgcgtccggcagcttc
tacggcgaattccgctggatcaactcatgggaaggccagtcgcaccgacggcacttcggc
acgcacgacgagccggtgtgctggacgcagatcggttacgcctgcggctacacctctgcg
ttcatgggtcgttcgatcctgtacaaggaggtcgaatgcgtcggcatgggcgacgagggc
tgccgcatcgtcggcaagccggtcgaggaatgggaggacgccgacgagctcatgcgcttc
ttcacgcccgagtcgattgccgaccaattgatcgacctgcagacgcaagtcgtacagctg
cgctcgacgatcggcgagaagaaccagcttcccggcgacatgatcggcacatcgcccggt
tttcgcgccgcgctcgcgctgctgagccaggcggcggcgagccacatctcggtgctgctg
ctcggcgagaccggcgtcggcaaggaactgttcgcccgcgcgctgcacgagatgagcacg
cgccgcgatcgtccgctggtggcgatcaactgcgcggcgatcccgcacgacctggtcgaa
tccgagctcttcggcgtcgagaagggcgcctataccggcgcgctgatgtcgcgccccgga
cgtttcgagcgcgccgacggcggcacgctgttcctcgacgagatcggcgagctgccgttg
acggcgcagagcaagctgctgcgcgtgctgcaggaaggcgaggtcgagcgcctcggcgac
gaccgggtgcgcaagatcaacgtgcgcctcgtcgcggcaaccaacgccgggctgccgcag
ctcgtcaaggaagggcgtttccgcgccgacctttactatcgcctcaacgcctaccaggtc
aatatcccgccgctgcgcgaacgccgcgaggacatctccgtcctcgccaagcatttcctc
gaaaagcacgccgcgatcaacggcaagaagctgctcggttttaccgacaaggccaagcgc
gcgctgaccacctacgcgtggcccggcaacatccgcgagctgcagaacaccgtcgaacgc
ggcgtcatcctcgcgccgcacggcacgcgcatcgaagtcgagcacctgttcctgtcctgg
ggcgacgaggcccgcgagttcgggctcgacccggacggcaagctcgacgccggggagggc
gatgccggtaagtcgatctgtgacgcggtctgcgacggcacgatgacgctcgaccaggtc
gaggcgatgctgatcgaggccgcgacggacaaggcgcgcggcaacctgtcgtccgcggca
cgcatgctcggcctgagccgcccgcagctcgcgtaccggctcaagcggctgcacgaaagc
ggccacgcgcgggcgacgccgcagcccctgcgcgaaccggggagcgtcgaatcttga
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