Aromatoleum bremense: pbN1_20050
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Entry
pbN1_20050 CDS
T07149
Symbol
xthA2
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
abre
Aromatoleum bremense
Pathway
abre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
pbN1_20050 (xthA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_20050 (xthA2)
Enzymes [BR:
abre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
pbN1_20050 (xthA2)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
pbN1_20050 (xthA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QTQ31995
LinkDB
All DBs
Position
complement(2104559..2105341)
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AA seq
260 aa
AA seq
DB search
MLRVITLNLNGVRSAVSKGFLDWLAAQDADVVCVQELKAQAGDLTDAVRTPDGYTGYFHH
AEKKGYSGVGLYTRRQPDRIVEGLGIADIDAEGRFLQLDFGPLSVVSLYLPSGSSSEERQ
QIKFGFMERFLPHLATLRACGREIIVCGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWFS
RVLEEQAWVDVYRRLYPDAGGEGYTWWSNRGQAWAKNVGWRLDYQIATPGIAATAKSAAV
YKAERFSDHAPLAVDYDFSF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcgtcatcaccctcaacctcaacggcgtccgctcggcggtcagcaagggcttc
ctcgactggctcgccgcgcaggacgccgatgtcgtctgcgtgcaggagctcaaggcacag
gccggcgacctcaccgacgcggtgcgcacgccggatggctacaccggctacttccaccac
gccgaaaagaaaggctatagcggcgtcgggctctacacccggcgacagcccgaccgcatc
gtcgaaggactcggcatcgccgacatcgacgccgaaggccgcttcctgcagctcgatttc
ggcccgctgtcggtggtgtcgctgtacctgccgtccggctccagctcggaggagcggcag
cagatcaaattcggcttcatggagcgcttcctgccacatctggcgacgctgcgcgcttgc
ggccgcgagatcatcgtctgcggcgactggaacatcgcgcacaaggaaatcgacctgaag
aactggaagtcgaaccagaagaattccggcttcctccccgaggagcgcgcctggttcagc
cgcgtgctcgaggagcaggcgtgggtcgacgtctatcgccggctgtaccccgacgccggc
ggcgaaggctacacgtggtggtcgaaccgtggccaggcgtgggcgaagaacgtcggctgg
cgcctcgactaccagatcgcgacgccgggcatcgccgcgactgcgaagtcggccgcggtc
tacaaagcggagcgcttcagcgaccacgcgcccctggctgtcgattacgatttcagcttc
tga
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