Aromatoleum bremense: pbN1_22510
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Entry
pbN1_22510 CDS
T07149
Symbol
rhlE2
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
abre
Aromatoleum bremense
Pathway
abre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
pbN1_22510 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abre03019
]
pbN1_22510 (rhlE2)
Enzymes [BR:
abre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
pbN1_22510 (rhlE2)
Messenger RNA biogenesis [BR:
abre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
pbN1_22510 (rhlE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_19
P-loop_SecA
CMS1
AAA_22
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QTQ32241
LinkDB
All DBs
Position
complement(2347348..2348877)
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AA seq
509 aa
AA seq
DB search
MTSEVNFAGLGLAEPLLRAISESGYTTPTPIQAQAIPLVLAGGDLLAAAQTGTGKTAGFT
LPVLHRLSAAPAANPKAGRPRCLILTPTRELAAQVEESVRTYGKHLPTTSMVMFGGVGIN
PQIQALKKRVDILVATPGRLLDHVGQKTLDLSGVEILILDEADRMLDMGFIRDIRKILAL
LPKQRQNLLFSATFSDEIRSLANGLLHNPGCVEVARRNTASELVQQSVYSVAQKQKRDLL
VHLVKQNDWHQVLVFTRTKHGANKLAEYLAKHGIPSAAIHGNKSQSARTRALAEFKDGSL
PVLVATDIAARGLDIDQLPHVVNFELPNVPEDYVHRIGRTGRAGSSGAAVSFVDSEERQH
LTAIERLIKRTIDREALPAFAIAPVDPNESDARPPRPQPRQPSRHNDANAPRQARTDRPA
GRQAAHPSSARAPTRPRDADNFGNRAPRSEVEANRTRPDADGNRAPRNAGPNGAPRGGDS
ARPTPRPDGNRRPQPRPALFNAKTDDRNR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagaagtaaactttgccggtctcggactggccgaaccgctgctgcgcgcaatt
tccgaatccggttacacgacgccaacgccgatccaggcacaggcgatccccctggtgctg
gccggcggtgacctgctcgccgcggcacagaccggcaccggcaagactgccggcttcacg
ttgccggtgctgcaccgcctctccgccgccccggctgcgaacccgaaggcgggacgaccg
cgctgcctgatcctgaccccgacgcgcgaactcgcagcgcaggtcgaggagtccgtccgg
acctacggcaagcacctgccgacgacatcgatggtgatgttcggcggggtcggcatcaac
ccgcagatccaggcgctgaagaaacgcgtcgacatcctcgtcgcgacgcccggccgcctg
ctcgaccacgtcggccagaagacgctcgacctgtcgggcgtcgagatcctgatcctcgac
gaagccgaccgcatgctcgacatgggcttcatccgcgacatccgcaagatcctcgcgctg
ctgccgaagcagcgccagaacctgctgttttcggcgaccttctcggacgagatccgcagc
ctcgccaacggcctgctgcacaacccgggctgcgtcgaagtcgcgcggcgcaacacggcg
tcggaactcgtgcagcagtcagtctattcggtggcgcagaagcagaagcgcgacctgctg
gtgcatctcgtcaagcaaaacgactggcaccaggtgctcgtcttcacgcgcaccaagcat
ggcgccaacaagctcgcggaatacctcgccaagcacggcatcccgtcggccgcaatccac
ggcaacaagagccagtcggcgcgtacccgcgcgctggccgaattcaaggacggttcgctg
ccggtgctggtcgcgaccgacatcgccgcgcgcggactggacatcgaccagttgccgcat
gtcgtgaacttcgaactgccaaacgttcccgaagactacgtccaccgcatcggccgcacc
ggccgcgccggctcgagcggcgcagcggtgtcgttcgtcgattcggaagagcgccagcac
ctgacggccatcgagcggctgatcaagcgcacgatcgaccgcgaagcgctgccggccttc
gcgatcgcgccggtcgacccgaacgagagcgacgcccgtcccccgcggccccagccgcgt
cagccgtcgcgacacaacgacgcgaacgcgccgcgccaggcacgcaccgaccgccccgcc
ggccggcaggcggcccacccgtcgtcggcccgtgctcccacccggccgcgcgacgccgac
aatttcggcaatcgcgccccgcgcagcgaggtcgaggctaaccgcacacgtcccgacgcg
gacggcaaccgggcgccgcgcaacgccgggccgaacggcgcgccacgcggtggtgacagc
gcccgcccgacgccgcgccccgacggcaaccgtcgcccgcaaccgcgtccggcactcttc
aacgccaagacggacgatcgcaaccgctga
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