Aromatoleum bremense: pbN1_23620
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Entry
pbN1_23620 CDS
T07149
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
abre
Aromatoleum bremense
Pathway
abre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
pbN1_23620 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abre03021
]
pbN1_23620 (rpoA)
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_23620 (rpoA)
Enzymes [BR:
abre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
pbN1_23620 (rpoA)
Transcription machinery [BR:
abre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
pbN1_23620 (rpoA)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
pbN1_23620 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QTQ32352
LinkDB
All DBs
Position
2460250..2461230
Genome browser
AA seq
326 aa
AA seq
DB search
MQSNSLLKPRIIDVQSVSPVQARVTMEPFERGFGHTLGNALRRILLSSLPGYAPTEVSIE
GVLHEYSTLDGVREDIVDLLLNLKGVVLKLHSRSEATLRLAKSGDGVVTARDIEVGHDVE
IINPDHVIAHLAPGGKLDMQIKVEEGRGYVPGNVRPAAGDTKTIGRVVLDASFSPVRRVS
YLVESARVEQRTDLDRLVIDIETNGAVDPEEAIRYAARVLMDQLSVFADLEGTAPVVEQS
AAQTIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEIK
EVLASRGLTLGMKLENWPPAGLEKLG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcaattcgctgctgaaaccccgcatcatcgacgtccagagtgtgtcgccggtc
caggcccgcgtcacgatggagccgttcgaacgcggtttcggccataccctggggaatgcg
ctgcggcgcattctcctgtcctcgttgccgggctatgcgccgaccgaagtgtccatcgaa
ggcgtgctgcatgagtattcgactcttgacggcgtgcgcgaggatatcgtcgatctgctg
ttgaacctcaagggcgtggtgctcaagctccatagccgcagcgaggcgaccctgcgcctg
gcgaagtctggcgatggtgtggtcaccgctcgcgacatcgaggttgggcacgacgtggaa
atcatcaacccggatcatgtgattgcgcacctcgcgccggggggaaagctcgacatgcag
atcaaggtcgaggaaggccgcggttacgtgccgggcaacgttcgtccggctgccggcgac
accaaaaccatcggccgcgtcgtgctcgacgcgtccttcagcccggtgcgacgcgtgagc
tacctggtcgagagcgcccgggtggaacagcggaccgacctcgaccggctggtgatcgac
atcgaaacgaacggcgcagtggatcccgaggaggccatccgctacgcggcgcgcgtcctc
atggatcagctgtcggtgtttgccgatctcgaaggcacggcgccggtcgtcgaacagtcg
gcggcgcagacgatcgacccggtgctgctgcgcccggtggatgatctggagttgacggtt
cggtcggccaactgcctgaaggcggagaacatttactacatcggcgacctgatccagcgc
actgagacggagttgctgaagactccgaatctgggccgcaagtcgttgaatgaaatcaag
gaagtgttggcctcccgtgggctgactctcgggatgaaactggaaaactggccgccggcc
gggctcgaaaagctcggttga
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