Aromatoleum bremense: pbN1_23900
Help
Entry
pbN1_23900 CDS
T07149
Name
(GenBank) Sigma54-dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
abre
Aromatoleum bremense
Pathway
abre02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
pbN1_23900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
abre02022
]
pbN1_23900
02035 Bacterial motility proteins [BR:
abre02035
]
pbN1_23900
Two-component system [BR:
abre02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
pbN1_23900
Bacterial motility proteins [BR:
abre02035
]
Pilus system
Twitching motility proteins
pbN1_23900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
HTH_23
HTH_20
HTH_28
VpsR
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QTQ32380
LinkDB
All DBs
Position
2489997..2491364
Genome browser
AA seq
455 aa
AA seq
DB search
MNYPERRQRPRTDVLVVDDEEDIREVLELSLMRMGLGCDTAGTIADARRLLGDRAYRLCL
TDMRLPDGDGIELVAHIQAHQPGLPVAVVTAYGSIETAIRALKAGAFDFVTKPVELKALR
ELVSHALRLDAPATAAPAASGRSLIGRSAALAHLRVQVEKLARNQAPVFIHGESGTGKEV
TACLIHELGPRVAGPFVPVNCGAISPELMESEFFGHRKGSFTGAVSDKDGLFQAARGGTL
FLDEVADLPLAMQVKLLRAIQERAVRPVGAHAEESVDVRILSASHRDLAQLVAAGKFRQD
LYFRINVITLRVPPLRERPEDIPELAAHILARLAEREGGAPRRLSADAAAELRQHAFPGN
VRELENLLERACALCDGDEIGVEDVKLHATTGIGQPLRFDFGDHPDDEHAGDGDDERLRV
LRMLDETRWNRSEAARRLGMTLRKLRYQLQKWGME
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaactaccccgaacgacgccaacgcccccgcaccgacgtcctcgtcgtcgacgacgag
gaagacatccgcgaagtgctcgaactgtcgctgatgcgcatgggcctcgggtgcgacacc
gccggcacgatcgccgatgcgcgccggttgctcggcgaccgggcttatcggctgtgtctc
accgacatgcgcctgcccgatggcgacggcatcgagctcgtcgcccacatccaggcccac
cagcccggcctgccggtcgccgtcgtgaccgcctacggcagcatcgaaactgcgattcgc
gcgctcaaggccggcgctttcgacttcgtcaccaagcccgtcgagctgaaggcgctgcgc
gaactcgtgagtcatgcgctcaggctcgacgcgccggccaccgccgcgccggccgcgagc
ggccgcagtctgatcgggcgctcggcggcgctcgcgcatttgcgcgtccaggtcgaaaag
ctcgcccgcaaccaggctccggtgttcatccacggcgaatccggcaccggcaaggaagtc
accgcgtgcctgatccacgagctcggcccgcgcgtcgccggaccgttcgtgccggtcaac
tgcggcgcgatctcgccggagctgatggaaagcgagttcttcggccatcgcaaaggcagc
ttcaccggcgcggtgtcggacaaggacggcctgttccaggcggcgcgcggcggtacgctg
ttcctcgacgaagtcgccgatctgccgctggcgatgcaggtgaagcttttgcgcgcgatc
caggagcgcgcggtgcgcccggtcggcgcgcacgccgaagagtcggtcgatgtgcgcatc
ctgtcggcgtcgcatcgcgacctcgcgcagctcgtcgccgcaggcaagttccgccaggat
ctgtacttccgcatcaacgtcatcacgctgcgcgtgccgccgctgcgcgaacgcccggaa
gatatcccggagcttgccgcgcacatcctcgcccggctcgccgagcgcgaaggcggcgcg
ccccgccgtctgagcgcggatgcggccgccgaactgcgccagcacgctttccccggcaac
gtgcgggagctcgaaaatcttctcgaacgcgcctgcgcgttgtgcgacggcgacgagatc
ggcgtcgaggacgtcaagctgcacgcgacgacaggcatcggtcagccgctgcgcttcgac
tttggcgaccaccccgatgacgagcacgccggcgacggcgacgacgagcgcctgcgcgtg
ctgcgcatgctcgacgagacccgctggaaccgctcggaggccgcacgccggctcggcatg
acgctgcggaagctgcgttaccagctgcagaaatggggaatggagtaa
DBGET
integrated database retrieval system
