Aromatoleum bremense: pbN1_24380
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Entry
pbN1_24380 CDS
T07149
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
abre
Aromatoleum bremense
Pathway
abre03030
DNA replication
abre03410
Base excision repair
abre03420
Nucleotide excision repair
abre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
pbN1_24380 (polA)
03410 Base excision repair
pbN1_24380 (polA)
03420 Nucleotide excision repair
pbN1_24380 (polA)
03440 Homologous recombination
pbN1_24380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abre03032
]
pbN1_24380 (polA)
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_24380 (polA)
Enzymes [BR:
abre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
pbN1_24380 (polA)
DNA replication proteins [BR:
abre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
pbN1_24380 (polA)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
pbN1_24380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
pbN1_24380 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF7059
Motif
Other DBs
NCBI-ProteinID:
QTQ32428
LinkDB
All DBs
Position
2532521..2535247
Genome browser
AA seq
908 aa
AA seq
DB search
MPVLLLVDGSSYLYRAFHALPDLRTSKGEPTGAIRGVLSMLRRLESDYKAEFRACVFDAK
GKTFRDDWYPQYKAHRPSMPDDLRAQVEPLHEAVKAEGWPLLCVDGVEADDVIGTLTRRA
LERGWEVVISTGDKDLTQLVRPGVRWVNTMSDEVLDEAGVTAKFGVPPTRIVDYLALVGD
TVDNIPGVEKCGPKTAVKWLTEYGTLDNLVANADKVGGKVGENLRKHLEFLPLGKRLVTV
ATDLTLPIQLEDLPARDDDKAALRALYERFEFRGWLQAIDDAAKSGAGADFAGKNDGLSP
VAEPGAHRAGYESILDWPTFDRWLAKLDAADLVAFDTETTSLDQMAAKLVGMSFAIVAGE
AAYLPLAHTYPAAPAQLPLAEVLAKLGPWLESDAHAKLGQNLKYDAHVLANHGLRLGGIA
HDTLLQSYVLESDKPHDMDSLAKRHLGLDTIPYTAVCGKGVGQICFDQVAIERATEYAAE
DADITLRLHRKLWPQLEAAPALAALYRDIEMPAMAVLFDMERTGVLIDAFLLAQQSEELG
RRLMTLEREAHDLAGQPFNLGSPKQLGEILFGKLGLPIVKKTSTGQPSTDEEVLAQLADD
YPLPKLLLEHRGLSKLKSTYTDKLPRMVNPKTGRVHTSFSQAVAVTGRLASSEPNLQNIP
IRTAEGRRIRAAFIAPRDHVIVSADYSQIELRIMAHLSNDARLLQSFAEGEDVHRATAAE
IFGTMPGEVTSEQRRYAKVINFGLIYGMSAHGLAKNLGLERAAAAAYIDRYFARYPGVAA
YMERTRSEARARGYVETVFGRRLYLPEIRASQAGRRQAAERAAINAPMQGTAADLIKKAM
IATRRWLADAQLRSRLVLQVHDELVLEVPRDELETVKATLPGVMAGVADLSVPLLVEVGS
GDNWDEAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgctgctgctcgtcgatggttccagctacctttaccgcgcgttccatgccttg
ccggacctgcggacgtcgaagggtgagccgacgggcgcgattcgcggtgtgctgtcgatg
ctacgtcgcctcgaaagcgactacaaggcggagttccgcgcctgcgtgttcgacgcgaaa
ggcaagactttccgcgacgactggtatccgcaatacaaggcgcaccggccgtcgatgccg
gatgacctgcgcgcccaggtcgaaccgctgcacgaggcggtcaaggccgaaggctggccg
ttgctgtgcgtcgacggcgtcgaggcggacgatgtcatcggcacgctgacgcgccgcgcc
ctcgagcgcggctgggaagtggtgatctcgaccggcgacaaggatctcacgcagctcgtg
cgccccggcgtgcggtgggtcaacacgatgagcgacgaagtgctcgacgaagccggtgtc
accgcgaagttcggcgtgccgccgacgcgcattgtcgactatctcgcgctcgtcggcgac
accgtcgacaacatcccgggcgtcgagaaatgcggcccgaagacggcggtgaaatggctc
accgaatacggcacgctcgacaacctcgtcgccaacgcggacaaggtcggcggcaaggtc
ggcgagaacctcaggaagcatcttgaattcctgccgctcggcaagcggctcgtgaccgtc
gcgaccgacctcacgctgccgatccaactcgaggatctgccggcgcgcgacgacgacaag
gccgcactgcgcgcgctgtacgagcgctttgaattccgcggctggctgcaggcaatcgac
gacgccgcgaaatcgggtgctggtgccgatttcgcaggaaaaaacgatggcctgtccccg
gttgcggagcccggcgcgcaccgcgccggctacgagagcatcctcgactggccgacgttc
gaccgctggctggcgaagctggacgccgccgacctcgtcgcgttcgacaccgagacgacc
agcctcgaccagatggccgcgaagctcgtcggcatgtcgttcgcgatcgtcgcgggcgaa
gccgcatacctgccgcttgcgcacacttatccggcggcgccggcgcagctgccgctcgcc
gaagtgctcgcgaagctcgggccgtggctcgagtccgacgcgcacgcgaagctcgggcag
aacctcaagtatgacgcccacgtgctcgcgaaccacggcctgcggctcggcggcatcgcg
cacgacacgctgctgcagtcctacgtgctcgagagcgacaagccgcacgacatggattcg
ctcgcgaagcgccacctcggcctcgacacgattccctacaccgcggtgtgcggcaagggc
gtcggccagatctgcttcgaccaggtcgcgatcgagcgtgcgaccgaatatgccgccgag
gacgccgacatcacgttgcggctgcaccgcaagctgtggccgcagctggaggcggcgccg
gcgctcgccgcgctgtaccgcgacatcgaaatgccggcgatggccgtgctgttcgacatg
gagcgcaccggcgtgctgatcgacgcgttcctgctcgcgcagcagagcgaagagctcggc
cgccggctgatgacgctcgagcgcgaggcccacgacctcgccggccagccgttcaacctc
ggctcgccgaaacagctcggcgagatcctgttcggcaagctcgggctgccgatcgtcaag
aagacctcgaccggccagccgtcgaccgacgaggaagtgctcgcccagctcgccgacgac
tacccgttgccgaagctgctgctcgagcaccgcgggctttcgaagctgaagagtacctac
accgacaagctgccgcgcatggtcaatccgaagaccggccgcgtgcacacgagcttctcg
caggcggtcgcggtcaccggccggctcgcgagctcggaaccgaacctgcagaacatcccg
atccgcaccgcggaaggacgccgcatccgcgccgcgttcatcgcgccgcgcgaccacgtc
atcgtatcggccgactattcgcagatcgagctgcgcatcatggcgcacctgtcgaatgat
gcgcggctgctgcagtcgttcgccgaaggggaggacgtgcaccgcgcgaccgccgcggag
attttcggcacgatgcccggcgaggtcacgagcgagcagcgccgctacgcgaaagtcatc
aacttcggcctgatctacggcatgagcgcgcacggcttggcgaagaacctgggcctcgaa
cgcgccgcggccgcggcctacatcgaccgctacttcgcgcgctaccccggcgttgccgcg
tacatggaacggacgcgcagcgaggcgagggcgcgcggctacgtcgagacggtgttcggc
cgccggctgtatctgccggagatccgcgcgagccaggccgggcgccgccaggccgccgag
cgcgcggcgatcaacgcgccgatgcagggcacggccgccgacctgatcaagaaggcgatg
atcgcgacacggcgctggctggccgacgcgcagctgcgttcgcggctcgtgctgcaggtg
cacgacgaactcgtgctcgaagtgccgcgcgacgaactcgaaacggtgaaggcgacgctg
cccggtgtgatggccggtgtcgccgacctgtcggtgccgctgctcgtcgaggtcggcagc
ggcgacaactgggacgaggcgcattga
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