Aromatoleum bremense: pbN1_25750
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Entry
pbN1_25750 CDS
T07149
Name
(GenBank) Putative ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
abre
Aromatoleum bremense
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abre03016
]
pbN1_25750
Enzymes [BR:
abre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
pbN1_25750
Transfer RNA biogenesis [BR:
abre03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
pbN1_25750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QTQ32564
LinkDB
All DBs
Position
complement(2674207..2676114)
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AA seq
635 aa
AA seq
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MFVLFEEDGAFKAGTVLADNDSSLQVETSHGKRVKLKSSHVLLQFREPAPGELLERAAAD
AEELDTGFLWEVCGDGEFGFQDFAAEYHGHAPNAVEAAAVLLRLHSAPIYFHRKGRGRFR
KAPAEILQAALAGLEKKRQQAEAIERMRSELVAGRLPPELAGMLPQLLYRPDRNRIETKA
FEAACVDAGLSAPRLLLKCGALASSYDFHYHRFLFEYFEDGVAFPPFEPPHEPAELPRAD
VAAFSIDDATTTEIDDAFSVTPRAGGGWRIGIHIAAPALGFARGSALDAIARRRLSTVYM
PGNKITMLPDAVVEAFTLAAGRDCPAVSLYLDVTAALAIVGHESRVERVPIVANLRHHDI
EPLFNEQVLHEQDGPDFEWKRELTLLWDLATVLEAGRGKAESNQNQVDFNFYVDWQTETA
DGAGYVTITQRRRGSPLDKLVAEMMILANATWGKLLDEAGVPGLYRAQSGGKVRMTTVAA
PHDGLGVDCYAWSSSPLRRYVDMINQWQIISVLRHEPPAFAPKSADLMAVLRDFELTYAA
YADFQRQMERYWCLRWLRQQPGIAVDGKVLRDNLVRLETIPLLLKVPSLPVQLPGSRVRL
TIEDSDVLDVDVRARYVETLAEPTPEEAADAALEG
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgctgttcgaagaggacggggccttcaaggccgggacggttctcgctgataac
gactcctcgctgcaggtggagacctctcacggcaaacgcgtgaaactgaaaagcagccat
gtgctgctgcagttccgcgagcccgcgccgggtgaactgctcgaacgcgccgcggccgac
gcagaggaactggacaccggtttcctgtgggaagtgtgcggcgacggcgagttcggcttc
caggacttcgccgccgagtaccacggccacgcgccgaacgccgtcgaagccgctgccgtg
ctgctgcgcctgcattcggcgccgatctatttccaccgcaaggggcgcgggcgtttccgc
aaggctcccgccgagatcctgcaggcggcgctcgccggcctggaaaagaagcgccagcag
gccgaggcgatcgagcgcatgcgcagcgaactcgtcgcaggacgcctgccgccggaactc
gccggcatgctgccgcagctgctgtaccgcccggaccgcaaccgcatcgagaccaaggcg
ttcgaggcggcatgcgtcgacgccggcctgtcggcgccgcggctgctgctcaagtgcggc
gcgctcgcatcgagctacgatttccactatcaccgcttcctgttcgaatatttcgaggac
ggcgtcgcgttcccgcctttcgaaccgccgcacgagccggccgagctgccgcgcgccgat
gtcgcggcgttctcgatcgacgacgcgacgacgaccgagatcgacgacgccttctcggtg
acgccgcgcgcaggcggcggctggcgcatcggcatccacatcgccgcgccggcgctcggc
tttgcgcgcggctcggcgctcgatgcgatcgcgcgccgccggctgtcgacggtgtatatg
ccgggcaacaagatcacgatgctgccggacgcggtcgtcgaggcgttcacgctcgccgcc
gggcgcgactgtccggcggtgtcgctgtacctcgacgtcaccgcggcgctggcgatcgtc
ggccacgagagccgcgtcgagcgcgtgccaatcgtcgcgaacctgcgccaccatgacatc
gagccgctgttcaacgagcaggtattgcacgagcaggacggccccgacttcgagtggaag
cgcgagctcaccttgctgtgggatctcgcgacggtgctcgaagccggccgcggcaaggcc
gaatccaaccagaaccaggtcgatttcaacttctacgtcgactggcagaccgagaccgcc
gacggcgccggctacgtgacgatcacgcagcgccggcgcggttcaccgctcgacaagctg
gtcgccgagatgatgatcctggcgaacgcgacctggggcaagctgctcgacgaggccggc
gtgccgggcctctatcgcgcccagagcggcggcaaggtgcgcatgacgacggtcgccgcg
ccgcatgacggcctcggcgtcgactgctacgcgtggtcgagttcgccgctgcgccgctac
gtcgacatgatcaaccagtggcagatcatctcggtgctgcgccacgagccgccggccttc
gcgccgaagtcggcggacctgatggcggtgctgcgcgacttcgaactgacctacgccgca
tacgccgacttccagcgccagatggagcgctactggtgcctgcgctggctgcgccagcag
cccggcatcgcggtcgacggcaaggtgctgcgcgacaacctcgtgcgcctggagacgatt
ccactgctgctgaaagtgccgtcgctgccggtgcagctgccgggcagccgcgtgcgcttg
acgatcgaggacagcgacgtgctcgacgtcgacgtccgcgcgcgctacgtcgagacgctc
gccgagccgaccccggaagaggccgcagacgccgcgctggaaggctga
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