Entry |
|
Symbol |
recQ
|
Name |
(GenBank) ATP-dependent DNA helicase RecQ
|
KO |
|
Organism |
abre Aromatoleum bremense
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:abre00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
pbN1_27680 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:abre03019]
pbN1_27680 (recQ)
03400 DNA repair and recombination proteins [BR:abre03400]
pbN1_27680 (recQ)
Enzymes [BR:abre01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
pbN1_27680 (recQ)
Messenger RNA biogenesis [BR:abre03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
pbN1_27680 (recQ)
DNA repair and recombination proteins [BR:abre03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
pbN1_27680 (recQ)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2893282..2895114)
|
AA seq |
610 aa
MLPMTPAAASPSSLHILEHVFGYTAFRGEQEAIVEHVAAGGDALVLMPTGGGKSLCFQIP
ALMRAGTAVVVSPLIALMQDQVSALREAGVAAAYLNSSQAADESAAVERDLVGGRLDLLY
VAPERLLTGRLLATLDRLHEAGRIALFAIDEAHCVSQWGHDFRPEYLQLSVLSERFPAVP
RIALTATADPETREEIAQRLALGDARRFVSSFDRPNIRYRMVDKDNPRAQLLAFIRDDHA
GEAGIVYCLSRRKVEETAAWLGEQGIRALAYHAGMAQEIRAAHQSRFLREDGIVMVATIA
FGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLAAQAWMAWGAQDIVQQRRMIDES
EGADDFKWRARARLDALVGLVETTGCRRQFLLAHFGEEGEACGNCDNCLEPPRTWDATDA
ARRALSGVFRTGQRFGAGHVIDVLRGELTDKVRDWKHDQVSTFGIGAELDDKTWRTLFRQ
LVARGLLAVDHDRHSALTLTDLARPLLRGEAEFALRLAPEKRRSKRSRSTRLEIPDGVPL
TLFDRLRAWRAATARERNVPAYVIFHDATLREIALARPVSLAELAGISGIGDRKLEAYGA
DILAEIAREV |
NT seq |
1833 nt +upstreamnt +downstreamnt
atgctgccgatgactcccgctgcagcttccccctcctcgctccacattctcgaacacgtc
ttcggctacaccgcattccgcggcgagcaggaggcgatcgtcgaacacgttgccgccggt
ggcgacgccctggtcctgatgccgaccggcggcggcaagtcgctgtgcttccagatcccg
gcgctgatgcgcgcgggcaccgcggtggtcgtgtcgccgctgatcgcgctgatgcaggac
caggtcagcgcgctgcgcgaagccggcgtcgcggccgcctatctgaactccagccaggcc
gccgacgaatccgccgcggtcgagcgcgacctcgtcggcggacggctcgacctgctgtac
gtcgcgccggagcgcctgctgaccgggcgcctgctcgcgacgctcgaccggctgcacgag
gccggacgcatcgcgctgttcgcgatcgacgaggcgcactgcgtgtcgcagtggggccac
gacttccgcccggaatacctgcagctgtcggtgctgtccgaacgcttcccggcggtgccg
cggatcgcgctgaccgcgaccgccgaccccgaaacccgcgaggaaatcgcccagcgcctc
gcgctcggcgacgcgcgccgcttcgtgtcgagcttcgaccggccgaacatccgctaccgc
atggtcgacaaggacaacccgcgcgcgcagctgctcgcgttcatccgcgacgatcacgcc
ggcgaagcgggcatcgtgtattgcctgtcgcggcgcaaggtcgaggagaccgcggcatgg
ctcggcgaacagggcatccgcgcgctcgcttaccacgccggcatggcgcaggaaatccgc
gccgcgcaccagagccgcttcctgcgggaggacggcatcgtcatggtcgcgacgatcgcg
ttcggcatgggcatcgacaagcccgacgtgcgcttcgtcgcgcacctcgacctgccgcgc
tcgatcgaaggctattaccaagagaccggccgcgccggtcgcgacggcctcgcggcgcag
gcgtggatggcgtggggcgcgcaggacatcgtgcagcagcggcgcatgatcgacgaatcc
gaaggcgcggacgacttcaagtggcgggcgcgggcgcggctcgacgcgctggtcggcctg
gtcgagacgaccggctgccggcgccagttcctgctcgcgcatttcggcgaagagggcgag
gcctgcggcaactgcgacaactgtctcgagccgccgcgcacgtgggacgcgaccgacgcg
gcgcgtcgcgcgctgtcgggcgtgttccgcaccggccagcgcttcggcgccggccacgtc
atcgacgtgctgcgcggcgaactcaccgacaaggtgcgcgactggaagcacgaccaggtc
agcacgttcggcatcggcgccgagctcgacgacaagacctggcgcacgctgttccgccag
ctcgtcgcgcgggggctgctcgcggtcgaccacgaccgccacagcgcgctgacgctgacc
gacctcgcccgcccgctgctgcgcggcgaagccgaattcgcgctgcgcctggcgccggaa
aagcggcgttcgaagcgcagccgcagcacccgcctggagatacccgacggcgtgccgctg
accttgttcgaccgcctgcgcgcgtggcgagcggcgaccgcgcgcgaacgcaacgtgcct
gcctacgtgatcttccacgacgcgacgctgcgcgaaatcgcgctcgcccgcccggtgagc
ctcgccgaactcgcgggcatctcgggcatcggcgaccgcaagctcgaggcgtacggcgcg
gacatcctcgccgagatcgcgcgcgaagtctga |