KEGG   Aromatoleum bremense: pbN1_27680
Entry
pbN1_27680        CDS       T07149                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
abre  Aromatoleum bremense
Pathway
abre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    pbN1_27680 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abre03019]
    pbN1_27680 (recQ)
   03400 DNA repair and recombination proteins [BR:abre03400]
    pbN1_27680 (recQ)
Enzymes [BR:abre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     pbN1_27680 (recQ)
Messenger RNA biogenesis [BR:abre03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     pbN1_27680 (recQ)
DNA repair and recombination proteins [BR:abre03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      pbN1_27680 (recQ)
SSDB
Motif
Pfam: RQC HRDC DEAD RecQ_Zn_bind Helicase_C T4SS-DNA_transf
Other DBs
NCBI-ProteinID: QTQ32756
LinkDB
Position
complement(2893282..2895114)
AA seq 610 aa
MLPMTPAAASPSSLHILEHVFGYTAFRGEQEAIVEHVAAGGDALVLMPTGGGKSLCFQIP
ALMRAGTAVVVSPLIALMQDQVSALREAGVAAAYLNSSQAADESAAVERDLVGGRLDLLY
VAPERLLTGRLLATLDRLHEAGRIALFAIDEAHCVSQWGHDFRPEYLQLSVLSERFPAVP
RIALTATADPETREEIAQRLALGDARRFVSSFDRPNIRYRMVDKDNPRAQLLAFIRDDHA
GEAGIVYCLSRRKVEETAAWLGEQGIRALAYHAGMAQEIRAAHQSRFLREDGIVMVATIA
FGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLAAQAWMAWGAQDIVQQRRMIDES
EGADDFKWRARARLDALVGLVETTGCRRQFLLAHFGEEGEACGNCDNCLEPPRTWDATDA
ARRALSGVFRTGQRFGAGHVIDVLRGELTDKVRDWKHDQVSTFGIGAELDDKTWRTLFRQ
LVARGLLAVDHDRHSALTLTDLARPLLRGEAEFALRLAPEKRRSKRSRSTRLEIPDGVPL
TLFDRLRAWRAATARERNVPAYVIFHDATLREIALARPVSLAELAGISGIGDRKLEAYGA
DILAEIAREV
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgctgccgatgactcccgctgcagcttccccctcctcgctccacattctcgaacacgtc
ttcggctacaccgcattccgcggcgagcaggaggcgatcgtcgaacacgttgccgccggt
ggcgacgccctggtcctgatgccgaccggcggcggcaagtcgctgtgcttccagatcccg
gcgctgatgcgcgcgggcaccgcggtggtcgtgtcgccgctgatcgcgctgatgcaggac
caggtcagcgcgctgcgcgaagccggcgtcgcggccgcctatctgaactccagccaggcc
gccgacgaatccgccgcggtcgagcgcgacctcgtcggcggacggctcgacctgctgtac
gtcgcgccggagcgcctgctgaccgggcgcctgctcgcgacgctcgaccggctgcacgag
gccggacgcatcgcgctgttcgcgatcgacgaggcgcactgcgtgtcgcagtggggccac
gacttccgcccggaatacctgcagctgtcggtgctgtccgaacgcttcccggcggtgccg
cggatcgcgctgaccgcgaccgccgaccccgaaacccgcgaggaaatcgcccagcgcctc
gcgctcggcgacgcgcgccgcttcgtgtcgagcttcgaccggccgaacatccgctaccgc
atggtcgacaaggacaacccgcgcgcgcagctgctcgcgttcatccgcgacgatcacgcc
ggcgaagcgggcatcgtgtattgcctgtcgcggcgcaaggtcgaggagaccgcggcatgg
ctcggcgaacagggcatccgcgcgctcgcttaccacgccggcatggcgcaggaaatccgc
gccgcgcaccagagccgcttcctgcgggaggacggcatcgtcatggtcgcgacgatcgcg
ttcggcatgggcatcgacaagcccgacgtgcgcttcgtcgcgcacctcgacctgccgcgc
tcgatcgaaggctattaccaagagaccggccgcgccggtcgcgacggcctcgcggcgcag
gcgtggatggcgtggggcgcgcaggacatcgtgcagcagcggcgcatgatcgacgaatcc
gaaggcgcggacgacttcaagtggcgggcgcgggcgcggctcgacgcgctggtcggcctg
gtcgagacgaccggctgccggcgccagttcctgctcgcgcatttcggcgaagagggcgag
gcctgcggcaactgcgacaactgtctcgagccgccgcgcacgtgggacgcgaccgacgcg
gcgcgtcgcgcgctgtcgggcgtgttccgcaccggccagcgcttcggcgccggccacgtc
atcgacgtgctgcgcggcgaactcaccgacaaggtgcgcgactggaagcacgaccaggtc
agcacgttcggcatcggcgccgagctcgacgacaagacctggcgcacgctgttccgccag
ctcgtcgcgcgggggctgctcgcggtcgaccacgaccgccacagcgcgctgacgctgacc
gacctcgcccgcccgctgctgcgcggcgaagccgaattcgcgctgcgcctggcgccggaa
aagcggcgttcgaagcgcagccgcagcacccgcctggagatacccgacggcgtgccgctg
accttgttcgaccgcctgcgcgcgtggcgagcggcgaccgcgcgcgaacgcaacgtgcct
gcctacgtgatcttccacgacgcgacgctgcgcgaaatcgcgctcgcccgcccggtgagc
ctcgccgaactcgcgggcatctcgggcatcggcgaccgcaagctcgaggcgtacggcgcg
gacatcctcgccgagatcgcgcgcgaagtctga

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